replace Exceptions calls with logger

Core/src/org/sleuthkit/autopsy/corecomponents/ThumbnailViewNode.java

@@ -23,14 +23,15 @@ import java.awt.Toolkit;
 import java.awt.event.ActionEvent;
 import java.lang.ref.SoftReference;
 import java.util.concurrent.ExecutionException;
+import java.util.logging.Level;
 import javax.swing.SwingWorker;
 import javax.swing.Timer;
 import org.netbeans.api.progress.ProgressHandle;
 import org.netbeans.api.progress.ProgressHandleFactory;
 import org.openide.nodes.FilterNode;
 import org.openide.nodes.Node;
-import org.openide.util.Exceptions;
 import org.sleuthkit.autopsy.coreutils.ImageUtils;
+import org.sleuthkit.autopsy.coreutils.Logger;
 import org.sleuthkit.datamodel.Content;
 
 /**
@@ -101,7 +102,7 @@ class ThumbnailViewNode extends FilterNode {
                                 timer = null;
                             }
                         } catch (InterruptedException | ExecutionException ex) {
-                            Exceptions.printStackTrace(ex);
+                            Logger.getLogger(ThumbnailViewNode.class.getName()).log(Level.SEVERE, "Error getting thumbnail icon", ex); //NON-NLS
                         }
                         swingWorker = null;
                     }

Core/src/org/sleuthkit/autopsy/datamodel/AbstractContentChildren.java

@@ -21,9 +21,7 @@ package org.sleuthkit.autopsy.datamodel;
 import org.openide.nodes.AbstractNode;
 import org.openide.nodes.Children.Keys;
 import org.openide.nodes.Node;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
-import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.datamodel.Content;
 import org.sleuthkit.datamodel.DerivedFile;
 import org.sleuthkit.datamodel.Directory;
@@ -33,8 +31,6 @@ import org.sleuthkit.datamodel.LayoutFile;
 import org.sleuthkit.datamodel.LocalFile;
 import org.sleuthkit.datamodel.SleuthkitItemVisitor;
 import org.sleuthkit.datamodel.SleuthkitVisitableItem;
-import org.sleuthkit.datamodel.TskCoreException;
-import org.sleuthkit.datamodel.TskException;
 import org.sleuthkit.datamodel.VirtualDirectory;
 import org.sleuthkit.datamodel.Volume;
 

Core/src/org/sleuthkit/autopsy/datamodel/InterestingHits.java

@@ -36,7 +36,6 @@ import org.openide.nodes.ChildFactory;
 import org.openide.nodes.Children;
 import org.openide.nodes.Node;
 import org.openide.nodes.Sheet;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.openide.util.lookup.Lookups;
 import org.sleuthkit.autopsy.casemodule.Case;
@@ -336,7 +335,7 @@ public class InterestingHits implements AutopsyVisitableItem {
             try {
                 return new BlackboardArtifactNode(skCase.getBlackboardArtifact(l));
             } catch (TskCoreException ex) {
-                Exceptions.printStackTrace(ex);
+                logger.log(Level.SEVERE, "Error creating new Blackboard Artifact node", ex); //NON-NLS
                 return null;
             }
         }

Core/src/org/sleuthkit/autopsy/directorytree/ExtractUnallocAction.java

@@ -38,7 +38,6 @@ import javax.swing.SwingWorker;
 import org.netbeans.api.progress.ProgressHandle;
 import org.netbeans.api.progress.ProgressHandleFactory;
 import org.openide.util.Cancellable;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.autopsy.coreutils.Logger;

Core/src/org/sleuthkit/autopsy/modules/filetypeid/FileTypeIdGlobalSettingsPanel.java

@@ -23,9 +23,7 @@ import java.beans.PropertyChangeEvent;
 import java.beans.PropertyChangeListener;
 import java.io.UnsupportedEncodingException;
 import java.nio.charset.Charset;
-import java.util.ArrayList;
 import java.util.Collections;
-import java.util.Map;
 import javax.swing.DefaultComboBoxModel;
 import javax.swing.DefaultListModel;
 import javax.swing.JOptionPane;
@@ -34,7 +32,6 @@ import javax.swing.event.DocumentListener;
 import javax.swing.event.ListSelectionEvent;
 import javax.swing.event.ListSelectionListener;
 import javax.xml.bind.DatatypeConverter;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.corecomponents.OptionsPanel;
 import org.sleuthkit.autopsy.ingest.IngestManager;

Core/src/org/sleuthkit/autopsy/modules/hashdatabase/HashLookupSettingsPanel.java

@@ -34,7 +34,6 @@ import javax.swing.event.ListSelectionEvent;
 import javax.swing.event.ListSelectionListener;
 import javax.swing.table.AbstractTableModel;
 import javax.swing.table.TableCellRenderer;
-import org.openide.util.Exceptions;
 
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.corecomponents.OptionsPanel;

Core/src/org/sleuthkit/autopsy/report/ReportHTML.java

@@ -42,7 +42,6 @@ import java.util.TreeMap;
 import java.util.logging.Level;
 import org.openide.filesystems.FileObject;
 import org.openide.filesystems.FileUtil;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.autopsy.casemodule.services.Services;
@@ -382,7 +381,7 @@ class ReportHTML implements TableReportModule {
         try {
             out.write("</div>\n</body>\n</html>\n"); //NON-NLS
         } catch (IOException ex) {
-            Exceptions.printStackTrace(ex);
+            logger.log(Level.SEVERE, "Failed to write end of HTML report.", ex); //NON-NLS
         } finally {
             if (out != null) {
                 try {

Core/src/org/sleuthkit/autopsy/timeline/db/EventsRepository.java

@@ -49,7 +49,6 @@ import org.apache.commons.lang3.StringUtils;
 import org.joda.time.Interval;
 import org.netbeans.api.progress.ProgressHandle;
 import org.netbeans.api.progress.ProgressHandleFactory;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.autopsy.casemodule.services.TagsManager;
@@ -219,7 +218,7 @@ public class EventsRepository {
         try {
             return eventStripeCache.get(params);
         } catch (ExecutionException ex) {
-            Exceptions.printStackTrace(ex);
+            LOGGER.log(Level.SEVERE, "Failed to get event stripes", ex); //NON-NLS
             return Collections.emptyList();
         }
     }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/FXMLConstructor.java

@@ -21,11 +21,11 @@ package org.sleuthkit.autopsy.imagegallery;
 import java.io.IOException;
 import java.net.MalformedURLException;
 import java.net.URL;
+import java.util.logging.Level;
 import javafx.fxml.FXMLLoader;
 import javafx.scene.Node;
 import org.apache.commons.lang3.StringUtils;
-import org.openide.util.Exceptions;
+import org.sleuthkit.autopsy.coreutils.Logger;
-
 /**
  * This class supports programmer productivity by abstracting frequently used
  * code to load FXML-defined GUI components,
@@ -35,10 +35,11 @@ import org.openide.util.Exceptions;
  * http://stackoverflow.com/questions/11734885/javafx2-very-poor-performance-when-adding-custom-made-fxmlpanels-to-gridpane.
  */
 public class FXMLConstructor {
+    
+    private static Logger logger = Logger.getLogger(FXMLConstructor.class.getName());
 
     static public void construct(Node n, String fxmlFileName) {
         final String name = "nbres:/" + StringUtils.replace(n.getClass().getPackage().getName(), ".", "/") + "/" + fxmlFileName;
-//        System.out.println(name);
 
         try {
             FXMLLoader fxmlLoader = new FXMLLoader(new URL(name));
@@ -52,11 +53,13 @@ public class FXMLConstructor {
                     fxmlLoader.setClassLoader(FXMLLoader.getDefaultClassLoader());
                     fxmlLoader.load();
                 } catch (IOException ex) {
-                    Exceptions.printStackTrace(ex);
+                    String msg = String.format("Failed to load fxml file %s", fxmlFileName);
+                    logger.log(Level.SEVERE, msg, ex);
                 }
             }
         } catch (MalformedURLException ex) {
-            Exceptions.printStackTrace(ex);
+            String msg = String.format("Malformed URL %s", name);
+            logger.log(Level.SEVERE, msg, ex);
         }
 
     }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/ImageGalleryController.java

@@ -56,7 +56,6 @@ import org.apache.commons.lang3.StringUtils;
 import org.netbeans.api.progress.ProgressHandle;
 import org.netbeans.api.progress.ProgressHandleFactory;
 import org.openide.util.Cancellable;
-import org.openide.util.Exceptions;
 import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.autopsy.casemodule.events.ContentTagAddedEvent;
 import org.sleuthkit.autopsy.casemodule.events.ContentTagDeletedEvent;
@@ -534,7 +533,7 @@ public final class ImageGalleryController {
                     });
 
                 } catch (InterruptedException ex) {
-                    Exceptions.printStackTrace(ex);
+                    LOGGER.log(Level.SEVERE, "Failed to run DB worker thread", ex);
                 }
             }
         }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/actions/OpenHelpAction.java

@@ -23,11 +23,12 @@ import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
 import java.io.IOException;
 import java.net.URI;
+import java.util.logging.Level;
 import org.openide.awt.ActionID;
 import org.openide.awt.ActionReference;
 import org.openide.awt.ActionRegistration;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle.Messages;
+import org.sleuthkit.autopsy.coreutils.Logger;
 
 @ActionID(
         category = "Help",
@@ -45,7 +46,7 @@ public final class OpenHelpAction implements ActionListener {
         try {
             Desktop.getDesktop().browse(URI.create("http://sleuthkit.org/autopsy/docs/user-docs/4.0/image_gallery_page.html"));
         } catch (IOException ex) {
-            Exceptions.printStackTrace(ex);
+            Logger.getLogger(OpenHelpAction.class.getName()).log(Level.SEVERE, "failed to open help page", ex);
         }
     }
 }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/datamodel/DrawableDB.java

@@ -44,7 +44,6 @@ import java.util.logging.Level;
 import javax.annotation.concurrent.GuardedBy;
 import javax.swing.SortOrder;
 import org.apache.commons.lang3.StringUtils;
-import org.openide.util.Exceptions;
 import org.sleuthkit.autopsy.casemodule.Case;
 import org.sleuthkit.autopsy.coreutils.Logger;
 import org.sleuthkit.autopsy.imagegallery.FileTypeUtils;
@@ -509,7 +508,8 @@ public final class DrawableDB {
                 }
             }
         } catch (SQLException ex) {
-            Exceptions.printStackTrace(ex);
+            String msg = String.format("Failed to get is group seen for group key %s", groupKey.getValueDisplayName());
+            LOGGER.log(Level.WARNING, msg, ex);
         } finally {
             dbReadUnlock();
         }
@@ -652,7 +652,8 @@ public final class DrawableDB {
                 return analyzedQuery.getBoolean(ANALYZED);
             }
         } catch (SQLException ex) {
-            Exceptions.printStackTrace(ex);
+            String msg = String.format("Failed to determine if file %s is finalized", String.valueOf(fileId));
+            LOGGER.log(Level.WARNING, msg, ex);
         } finally {
             dbReadUnlock();
         }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/drawableviews/SlideShowView.java

@@ -56,7 +56,6 @@ import javafx.scene.media.Media;
 import javafx.scene.media.MediaException;
 import javafx.scene.media.MediaPlayer;
 import javafx.scene.text.Text;
-import org.openide.util.Exceptions;
 import org.sleuthkit.autopsy.coreutils.Logger;
 import org.sleuthkit.autopsy.coreutils.ThreadConfined;
 import org.sleuthkit.autopsy.coreutils.ThreadConfined.ThreadType;
@@ -142,7 +141,7 @@ public class SlideShowView extends DrawableTileBase {
             try {
                 GuiUtils.createSelTagMenuItem(getController().getTagsManager().getFollowUpTagName(), tagSplitButton, getController()).getOnAction().handle(t);
             } catch (TskCoreException ex) {
-                Exceptions.printStackTrace(ex);
+                LOGGER.log(Level.SEVERE, "failed to create tag menu item", ex);
             }
         });
 

KeywordSearch/src/org/sleuthkit/autopsy/keywordsearch/ExtractedContentViewer.java

@@ -36,7 +36,6 @@ import org.sleuthkit.datamodel.BlackboardArtifact;
 import org.sleuthkit.datamodel.Content;
 import org.sleuthkit.datamodel.ContentVisitor;
 import org.sleuthkit.datamodel.Directory;
-import org.openide.util.Exceptions;
 import org.sleuthkit.datamodel.TskCoreException;
 import org.sleuthkit.datamodel.BlackboardAttribute;
 

KeywordSearch/src/org/sleuthkit/autopsy/keywordsearch/Ingester.java

@@ -29,7 +29,6 @@ import java.util.logging.Level;
 import org.apache.solr.client.solrj.SolrServerException;
 import org.apache.solr.common.util.ContentStream;
 import org.apache.solr.common.SolrInputDocument;
-import org.openide.util.Exceptions;
 import org.openide.util.NbBundle;
 import org.sleuthkit.autopsy.coreutils.Logger;
 import org.sleuthkit.autopsy.datamodel.ContentUtils;
@@ -300,7 +299,7 @@ class Ingester {
                 try {
                     s = new String(docChunkContentBuf, 0, read, docContentEncoding);
                 } catch (UnsupportedEncodingException ex) {
-                    Exceptions.printStackTrace(ex);
+                    logger.log(Level.SEVERE, "Unsupported encoding", ex); //NON-NLS
                 }
                 updateDoc.addField(Server.Schema.CONTENT.toString(), s);
             } else {

Testing/test/qa-functional/src/org/sleuthkit/autopsy/testing/RegressionTest.java

@@ -24,18 +24,12 @@ import java.awt.Robot;
 import java.awt.Toolkit;
 import java.awt.image.BufferedImage;
 import java.io.File;
-import java.io.FileWriter;
 import java.io.IOException;
-import java.lang.reflect.Field;
-import java.lang.reflect.InvocationTargetException;
-import java.lang.reflect.Method;
-import java.nio.file.Files;
 import java.text.DateFormat;
 import java.text.SimpleDateFormat;
 import java.util.ArrayList;
 import java.util.Date;
 import java.util.List;
-import java.util.Map;
 import java.util.Random;
 import java.util.logging.Level;
 import java.util.logging.Logger;
@@ -61,9 +55,7 @@ import org.netbeans.jemmy.operators.JTableOperator;
 import org.netbeans.jemmy.operators.JTextFieldOperator;
 import org.netbeans.jemmy.operators.JListOperator;
 import org.netbeans.junit.NbModuleSuite;
-import org.openide.util.Exceptions;
 import org.sleuthkit.autopsy.ingest.IngestManager;
-import org.sleuthkit.autopsy.keywordsearch.*;
 
 /**
  * This test expects the following system properties to be set: img_path: The