mirror of
https://github.com/overcuriousity/autopsy-flatpak.git
synced 2025-07-16 09:47:42 +00:00
Merge remote-tracking branch 'upstream/develop' into 2093-parameterizeRegressionPythonScript
This commit is contained in:
U-BASIS\zhaohui
commit
03a639c3da
@ -39,6 +39,7 @@ import org.sleuthkit.datamodel.TskCoreException;
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* artifact's attributes.
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*/
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class ArtifactTextExtractor implements TextExtractor<BlackboardArtifact> {
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static final private Logger logger = Logger.getLogger(ArtifactTextExtractor.class.getName());
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/**
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@ -82,26 +83,31 @@ class ArtifactTextExtractor implements TextExtractor<BlackboardArtifact> {
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}
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@Override
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public boolean isDisabled() {
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public boolean isDisabled() {
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return false;
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}
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}
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@Override
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public void logWarning(final String msg, Exception ex) {
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@Override
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public void logWarning(final String msg, Exception ex) {
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logger.log(Level.WARNING, msg, ex); //NON-NLS }
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}
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private InputStream getInputStream(BlackboardArtifact artifact) {
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private InputStream getInputStream(BlackboardArtifact artifact) throws TextExtractorException {
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// Concatenate the string values of all attributes into a single
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// "content" string to be indexed.
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StringBuilder artifactContents = new StringBuilder();
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Content dataSource = null;
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try {
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Content dataSource = getDataSource(artifact);
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if (dataSource == null) {
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return null;
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}
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dataSource = getDataSource(artifact);
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} catch (TskCoreException tskCoreException) {
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throw new TextExtractorException("Unable to get datasource for artifact: " + artifact.toString(), tskCoreException);
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}
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if (dataSource == null) {
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throw new TextExtractorException("Datasource was null for artifact: " + artifact.toString());
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}
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try {
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for (BlackboardAttribute attribute : artifact.getAttributes()) {
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artifactContents.append(attribute.getAttributeType().getDisplayName());
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artifactContents.append(" : ");
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@ -119,18 +125,15 @@ class ArtifactTextExtractor implements TextExtractor<BlackboardArtifact> {
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}
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artifactContents.append(System.lineSeparator());
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}
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} catch (TskCoreException ex) {
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logger.log(Level.SEVERE, "There was a problem getting the atributes for artifact " + artifact.getArtifactID(), ex);
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return null;
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}
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if (artifactContents.length() == 0) {
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return null;
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} catch (TskCoreException tskCoreException) {
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throw new TextExtractorException("Unable to get attributes for artifact: " + artifact.toString(), tskCoreException);
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}
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return IOUtils.toInputStream(artifactContents, StandardCharsets.UTF_8);
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}
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@Override
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public Reader getReader(BlackboardArtifact source) throws Ingester.IngesterException {
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public Reader getReader(BlackboardArtifact source) throws TextExtractorException {
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return new InputStreamReader(getInputStream(source), StandardCharsets.UTF_8);
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}
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@ -0,0 +1,310 @@
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/*
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* Autopsy Forensic Browser
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*
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* Copyright 2011-2016 Basis Technology Corp.
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* Contact: carrier <at> sleuthkit <dot> org
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*
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*/
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package org.sleuthkit.autopsy.keywordsearch;
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import java.io.IOException;
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import java.io.PushbackReader;
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import java.io.Reader;
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import java.nio.charset.StandardCharsets;
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import java.util.Iterator;
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import java.util.NoSuchElementException;
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import javax.annotation.concurrent.NotThreadSafe;
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import org.sleuthkit.autopsy.coreutils.TextUtil;
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import org.sleuthkit.autopsy.keywordsearch.Chunker.Chunk;
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/**
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* Encapsulates the content chunking algorithm in an implementation of the
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* Iterator interface. Also implements Iterable so it can be used directly in a
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* for loop. The base chunk is the part of the chunk before the overlapping
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* window. The window will be included at the end of the current chunk as well
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* as at the beginning of the next chunk.
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*/
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@NotThreadSafe
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class Chunker implements Iterator<Chunk>, Iterable<Chunk> {
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//Chunking algorithm paramaters-------------------------------------//
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/** the maximum size of a chunk, including the window. */
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private static final int MAX_TOTAL_CHUNK_SIZE = 32766; //bytes
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/** the minimum to read before we start the process of looking for
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* whitespace to break at and creating an overlapping window. */
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private static final int MINIMUM_BASE_CHUNK_SIZE = 30 * 1024; //bytes
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/** The maximum size of the chunk, before the overlapping window, even if we
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* couldn't find whitespace to break at. */
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private static final int MAXIMUM_BASE_CHUNK_SIZE = 31 * 1024; //bytes
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/** The amount of text we will read through before we give up on finding
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* whitespace to break the chunk/window at. */
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private static final int WHITE_SPACE_BUFFER_SIZE = 512; //bytes
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/** The number of characters to read in one go from the Reader. */
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private static final int READ_CHARS_BUFFER_SIZE = 512; //chars
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////chunker state--------------------------------------------///
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/** The Reader that this chunk reads from, and divides into chunks. It must
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* be a buffered reader to ensure that mark/reset are supported. */
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private final PushbackReader reader;
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/** The local buffer of characters read from the Reader. */
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private final char[] tempChunkBuf = new char[READ_CHARS_BUFFER_SIZE];
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/** the size in bytes of the chunk (so far). */
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private int chunkSizeBytes = 0;
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/** Has the chunker reached the end of the Reader? If so, there are no more
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* chunks, and the current chunk does not need a window. */
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private boolean endOfReaderReached = false;
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/** Store any exception encountered reading from the Reader. */
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private Exception ex;
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/**
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* Create a Chunker that will chunk the content of the given Reader.
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*
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* @param reader The content to chunk.
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*/
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Chunker(Reader reader) {
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//Using MAX_TOTAL_CHUNK_SIZE is safe but probably overkill.
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this.reader = new PushbackReader(reader, MAX_TOTAL_CHUNK_SIZE);
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}
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@Override
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public Iterator<Chunk> iterator() {
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return this;
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}
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/**
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* Has this Chunker encountered an exception reading from the Reader.
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*/
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boolean hasException() {
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return ex != null;
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}
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/**
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* Get the exception encountered reading from the Reader.
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*
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* @return The exception, or null if no exception was encountered.
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*/
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public Exception getException() {
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return ex;
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}
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@Override
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public boolean hasNext() {
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return (ex == null)
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&& (endOfReaderReached == false);
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}
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/**
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* Sanitize the given StringBuilder by replacing non-UTF-8 characters with
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* caret '^'
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*
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* @param sb the StringBuilder to sanitize
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*
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* //JMTODO: use Charsequence.chars() or codePoints() and then a mapping
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* function?
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*/
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private static StringBuilder sanitizeToUTF8(StringBuilder sb) {
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final int length = sb.length();
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for (int i = 0; i < length; i++) {
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if (TextUtil.isValidSolrUTF8(sb.charAt(i)) == false) {
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sb.replace(i, i + 1, "^");
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}
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}
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return sb;
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}
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@Override
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public Chunk next() {
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if (hasNext() == false) {
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throw new NoSuchElementException("There are no more chunks.");
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}
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//reset state for the next chunk
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chunkSizeBytes = 0;
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int baseChunkSizeChars = 0;
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StringBuilder currentChunk = new StringBuilder();
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StringBuilder currentWindow = new StringBuilder();
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try {
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currentChunk.append(readBaseChunk());
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baseChunkSizeChars = currentChunk.length(); //save the base chunk length
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currentWindow.append(readWindow());
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if (endOfReaderReached) {
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/* if we have reached the end of the content,we won't make
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* another overlapping chunk, so the length of the base chunk
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* can be extended to the end. */
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baseChunkSizeChars = currentChunk.length();
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} else {
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/* otherwise we will make another chunk, so unread the window */
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reader.unread(currentWindow.toString().toCharArray());
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}
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} catch (Exception ioEx) {
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/* Save the exception, which will cause hasNext() to return false,
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* and break any chunking loop in client code. */
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ex = ioEx;
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}
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//add the window text to the current chunk.
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currentChunk.append(currentWindow);
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//sanitize the text and return a Chunk object, that includes the base chunk length.
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return new Chunk(sanitizeToUTF8(currentChunk), baseChunkSizeChars);
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}
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/**
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* Read the base chunk from the reader, attempting to break at whitespace.
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*
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* @throws IOException if there is a problem reading from the reader.
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*/
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private StringBuilder readBaseChunk() throws IOException {
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StringBuilder currentChunk = new StringBuilder();
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//read the chunk until the minimum base chunk size
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readHelper(MINIMUM_BASE_CHUNK_SIZE, currentChunk);
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//keep reading until the maximum base chunk size or white space is reached.
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readToWhiteSpaceHelper(MAXIMUM_BASE_CHUNK_SIZE, currentChunk);
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return currentChunk;
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}
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/**
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* Read the window from the reader, attempting to break at whitespace.
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*
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* @throws IOException if there is a problem reading from the reader.
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*/
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private StringBuilder readWindow() throws IOException {
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StringBuilder currentWindow = new StringBuilder();
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//read the window, leaving some room to look for white space to break at.
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readHelper(MAX_TOTAL_CHUNK_SIZE - WHITE_SPACE_BUFFER_SIZE, currentWindow);
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//keep reading until the max chunk size, or until whitespace is reached.
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readToWhiteSpaceHelper(MAX_TOTAL_CHUNK_SIZE, currentWindow);
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return currentWindow;
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}
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/**
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* Read until the maxBytes reached, or end of reader.
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||||
*
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||||
* @param maxBytes
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* @param currentSegment
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*
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* @throws IOException
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||||
*/
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private void readHelper(int maxBytes, StringBuilder currentSegment) throws IOException {
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int charsRead = 0;
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//read chars up to maxBytes, or the end of the reader.
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while ((chunkSizeBytes < maxBytes)
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&& (endOfReaderReached == false)) {
|
||||
charsRead = reader.read(tempChunkBuf, 0, READ_CHARS_BUFFER_SIZE);
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if (-1 == charsRead) {
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//this is the last chunk
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endOfReaderReached = true;
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||||
return;
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||||
} else {
|
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//if the last char might be part of a surroate pair, unread it.
|
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final char lastChar = tempChunkBuf[charsRead - 1];
|
||||
if (Character.isHighSurrogate(lastChar)) {
|
||||
charsRead--;
|
||||
reader.unread(lastChar);
|
||||
}
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||||
|
||||
String chunkSegment = new String(tempChunkBuf, 0, charsRead);
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||||
|
||||
//get the length in bytes of the read chars
|
||||
int segmentSize = chunkSegment.getBytes(StandardCharsets.UTF_8).length;
|
||||
|
||||
//if it will not put us past maxBytes
|
||||
if (chunkSizeBytes + segmentSize < maxBytes) {
|
||||
//add it to the chunk
|
||||
currentSegment.append(chunkSegment);
|
||||
chunkSizeBytes += segmentSize;
|
||||
} else {
|
||||
//unread it, and break out of read loop.
|
||||
reader.unread(tempChunkBuf, 0, charsRead);
|
||||
return;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Read until the maxBytes reached, whitespace, or end of reader.
|
||||
*
|
||||
* @param maxBytes
|
||||
* @param currentSegment
|
||||
*
|
||||
* @throws IOException
|
||||
*/
|
||||
private void readToWhiteSpaceHelper(int maxBytes, StringBuilder currentSegment) throws IOException {
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||||
int charsRead = 0;
|
||||
boolean whitespaceFound = false;
|
||||
//read 1 char at a time up to maxBytes, whitespaceFound, or we reach the end of the reader.
|
||||
while ((chunkSizeBytes < maxBytes)
|
||||
&& (whitespaceFound == false)
|
||||
&& (endOfReaderReached == false)) {
|
||||
charsRead = reader.read(tempChunkBuf, 0, 1);
|
||||
if (-1 == charsRead) {
|
||||
//this is the last chunk
|
||||
endOfReaderReached = true;
|
||||
return;
|
||||
} else {
|
||||
//if the last charcter might be part of a surroate pair, read another char
|
||||
final char ch = tempChunkBuf[0];
|
||||
String chunkSegment;
|
||||
if (Character.isHighSurrogate(ch)) {
|
||||
charsRead = reader.read(tempChunkBuf, 1, 1);
|
||||
if (charsRead == -1) {
|
||||
//this is the last chunk, so include the unpaired surrogate
|
||||
currentSegment.append(ch);
|
||||
chunkSizeBytes += new Character(ch).toString().getBytes(StandardCharsets.UTF_8).length;
|
||||
endOfReaderReached = true;
|
||||
return;
|
||||
} else {
|
||||
//use the surrogate pair in place of the unpaired surrogate.
|
||||
chunkSegment = new String(tempChunkBuf, 0, 2);
|
||||
}
|
||||
} else {
|
||||
//one char
|
||||
chunkSegment = new String(tempChunkBuf, 0, 1);
|
||||
}
|
||||
//check for whitespace.
|
||||
whitespaceFound = Character.isWhitespace(chunkSegment.codePointAt(0));
|
||||
//add read chars to the chunk and update the length.
|
||||
currentSegment.append(chunkSegment);
|
||||
chunkSizeBytes += chunkSegment.getBytes(StandardCharsets.UTF_8).length;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Represents one chunk as the text in it and the length of the base chunk,
|
||||
* in chars.
|
||||
*/
|
||||
static class Chunk {
|
||||
|
||||
private final StringBuilder sb;
|
||||
private final int chunksize;
|
||||
|
||||
Chunk(StringBuilder sb, int baseChunkLength) {
|
||||
this.sb = sb;
|
||||
this.chunksize = baseChunkLength;
|
||||
}
|
||||
|
||||
@Override
|
||||
public String toString() {
|
||||
return sb.toString();
|
||||
}
|
||||
|
||||
int getBaseChunkLength() {
|
||||
return chunksize;
|
||||
}
|
||||
}
|
||||
}
|
||||
@ -95,7 +95,7 @@ abstract class FileTextExtractor implements TextExtractor< AbstractFile> {
|
||||
abstract boolean isSupported(AbstractFile file, String detectedFormat);
|
||||
|
||||
@Override
|
||||
public abstract Reader getReader(AbstractFile source) throws Ingester.IngesterException;
|
||||
public abstract Reader getReader(AbstractFile source) throws TextExtractorException;
|
||||
|
||||
@Override
|
||||
public long getID(AbstractFile source) {
|
||||
|
||||
@ -65,7 +65,7 @@ class HtmlTextExtractor extends FileTextExtractor {
|
||||
}
|
||||
|
||||
@Override
|
||||
public Reader getReader(AbstractFile sourceFile) throws Ingester.IngesterException {
|
||||
public Reader getReader(AbstractFile sourceFile) throws TextExtractorException {
|
||||
ReadContentInputStream stream = new ReadContentInputStream(sourceFile);
|
||||
|
||||
//Parse the stream with Jericho and put the results in a Reader
|
||||
@ -159,7 +159,7 @@ class HtmlTextExtractor extends FileTextExtractor {
|
||||
// All done, now make it a reader
|
||||
return new StringReader(stringBuilder.toString());
|
||||
} catch (IOException ex) {
|
||||
throw new Ingester.IngesterException("Error extracting HTML from content.", ex);
|
||||
throw new TextExtractorException("Error extracting HTML from content.", ex);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@ -18,22 +18,17 @@
|
||||
*/
|
||||
package org.sleuthkit.autopsy.keywordsearch;
|
||||
|
||||
import com.google.common.base.Utf8;
|
||||
import java.io.BufferedReader;
|
||||
import java.io.IOException;
|
||||
import java.util.HashMap;
|
||||
import java.util.Iterator;
|
||||
import java.util.Map;
|
||||
import java.util.NoSuchElementException;
|
||||
import java.util.logging.Level;
|
||||
import javax.annotation.concurrent.NotThreadSafe;
|
||||
import org.apache.solr.client.solrj.SolrServerException;
|
||||
import org.apache.solr.common.SolrInputDocument;
|
||||
import org.openide.util.NbBundle;
|
||||
import org.sleuthkit.autopsy.coreutils.Logger;
|
||||
import org.sleuthkit.autopsy.coreutils.TextUtil;
|
||||
import org.sleuthkit.autopsy.datamodel.ContentUtils;
|
||||
import org.sleuthkit.autopsy.ingest.IngestJobContext;
|
||||
import org.sleuthkit.autopsy.keywordsearch.Chunker.Chunk;
|
||||
import org.sleuthkit.datamodel.AbstractFile;
|
||||
import org.sleuthkit.datamodel.BlackboardArtifact;
|
||||
import org.sleuthkit.datamodel.DerivedFile;
|
||||
@ -149,8 +144,8 @@ class Ingester {
|
||||
int numChunks = 0; //unknown until chunking is done
|
||||
|
||||
if (extractor.isDisabled()) {
|
||||
/* some Extrctors, notable the strings extractor, have options which
|
||||
* can be configured such that no extraction should be done */
|
||||
/* some Extractors, notable the strings extractor, have options
|
||||
* which can be configured such that no extraction should be done */
|
||||
return true;
|
||||
}
|
||||
|
||||
@ -171,13 +166,12 @@ class Ingester {
|
||||
+ sourceName + "' (id: " + sourceID + ").", ingEx);//NON-NLS
|
||||
|
||||
throw ingEx; //need to rethrow to signal error and move on
|
||||
} catch (Exception ex) {
|
||||
throw new IngesterException(String.format("Error ingesting (indexing) file chunk: %s", chunkId), ex);
|
||||
}
|
||||
}
|
||||
} catch (IOException ex) {
|
||||
extractor.logWarning("Unable to read content stream from " + sourceID + ": " + sourceName, ex);//NON-NLS
|
||||
return false;
|
||||
if (chunker.hasException()) {
|
||||
extractor.logWarning("Error chunking content from " + sourceID + ": " + sourceName, chunker.getException());
|
||||
return false;
|
||||
}
|
||||
} catch (Exception ex) {
|
||||
extractor.logWarning("Unexpected error, can't read content stream from " + sourceID + ": " + sourceName, ex);//NON-NLS
|
||||
return false;
|
||||
@ -192,7 +186,7 @@ class Ingester {
|
||||
}
|
||||
|
||||
/**
|
||||
* Add one chunk as to the Solr index as a seperate sold document.
|
||||
* Add one chunk as to the Solr index as a separate Solr document.
|
||||
*
|
||||
* TODO see if can use a byte or string streaming way to add content to
|
||||
* /update handler e.g. with XMLUpdateRequestHandler (deprecated in SOlr
|
||||
@ -232,7 +226,7 @@ class Ingester {
|
||||
uncommitedIngests = true;
|
||||
|
||||
} catch (KeywordSearchModuleException ex) {
|
||||
//JMTODO: does this need to ne internationalized?
|
||||
//JMTODO: does this need to be internationalized?
|
||||
throw new IngesterException(
|
||||
NbBundle.getMessage(Ingester.class, "Ingester.ingest.exception.err.msg", sourceName), ex);
|
||||
}
|
||||
@ -370,211 +364,3 @@ class Ingester {
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Encapsulates the content chunking algorithm in an implementation of the
|
||||
* Iterator interface. Also implements Iterable so it can be used directly in a
|
||||
* for loop. The base chunk is the part of the chunk before the overlapping
|
||||
* window. The window will be included at the end of the current chunk as well
|
||||
* as at the beginning of the next chunk.
|
||||
*/
|
||||
@NotThreadSafe
|
||||
class Chunker implements Iterator<Chunk>, Iterable<Chunk> {
|
||||
|
||||
//Chunking algorithm paramaters-------------------------------------//
|
||||
/** the maximum size of a chunk, including the window. */
|
||||
private static final int MAX_TOTAL_CHUNK_SIZE = 32766; //bytes
|
||||
/** the minimum to read before we start the process of looking for
|
||||
* whitespace to break at and creating an overlapping window. */
|
||||
private static final int MINIMUM_BASE_CHUNK_SIZE = 30 * 1024; //bytes
|
||||
/** The maximum size of the chunk, before the overlapping window, even if we
|
||||
* couldn't find whitespace to break at. */
|
||||
private static final int MAXIMUM_BASE_CHUNK_SIZE = 31 * 1024; //bytes
|
||||
/** The amount of text we will read through before we give up on finding
|
||||
* whitespace to break the chunk/window at. */
|
||||
private static final int WHITE_SPACE_BUFFER_SIZE = 512; //bytes
|
||||
/** The number of characters to read in one go from the Reader. */
|
||||
private static final int READ_CHARS_BUFFER_SIZE = 512; //chars
|
||||
|
||||
////chunker state--------------------------------------------///
|
||||
/** The Reader that this chunk reads from, and divides into chunks. It must
|
||||
* be a buffered reader to ensure that mark/reset are supported. */
|
||||
private final BufferedReader reader;
|
||||
/** The local buffer of characters read from the Reader. */
|
||||
private final char[] tempChunkBuf = new char[READ_CHARS_BUFFER_SIZE];
|
||||
/** number of chars read in the most recent read operation. */
|
||||
private int charsRead = 0;
|
||||
|
||||
/** The text of the current chunk (so far). */
|
||||
private StringBuilder currentChunk;
|
||||
/** the size in bytes of the chunk (so far). */
|
||||
private int chunkSizeBytes = 0;
|
||||
/** the size in chars of the (base) chunk (so far). */
|
||||
private int baseChunkSizeChars;
|
||||
|
||||
/** has the chunker found whitespace to break on? */
|
||||
private boolean whitespaceFound = false;
|
||||
/** has the chunker reached the end of the Reader? If so, there are no more
|
||||
* chunks, and the current chunk does not need a window. */
|
||||
private boolean endOfReaderReached = false;
|
||||
|
||||
/**
|
||||
* Create a Chunker that will chunk the content of the given Reader.
|
||||
*
|
||||
* @param reader The content to chunk.
|
||||
*/
|
||||
Chunker(BufferedReader reader) {
|
||||
this.reader = reader;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Iterator<Chunk> iterator() {
|
||||
return this;
|
||||
}
|
||||
|
||||
@Override
|
||||
public boolean hasNext() {
|
||||
return endOfReaderReached == false;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sanitize the given StringBuilder by replacing non-UTF-8 characters with
|
||||
* caret '^'
|
||||
*
|
||||
* @param sb the StringBuilder to sanitize
|
||||
*
|
||||
* //JMTODO: use Charsequence.chars() or codePoints() and then a mapping
|
||||
* function?
|
||||
*/
|
||||
private static StringBuilder sanitizeToUTF8(StringBuilder sb) {
|
||||
final int length = sb.length();
|
||||
for (int i = 0; i < length; i++) {
|
||||
if (TextUtil.isValidSolrUTF8(sb.charAt(i)) == false) {
|
||||
sb.replace(i, i + 1, "^");
|
||||
}
|
||||
}
|
||||
return sb;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Chunk next() {
|
||||
if (endOfReaderReached) {
|
||||
throw new NoSuchElementException("There are no more chunks.");
|
||||
}
|
||||
//reset state for the next chunk
|
||||
currentChunk = new StringBuilder();
|
||||
chunkSizeBytes = 0;
|
||||
baseChunkSizeChars = 0;
|
||||
|
||||
try {
|
||||
readBaseChunk();
|
||||
baseChunkSizeChars = currentChunk.length();
|
||||
reader.mark(2048); //mark the reader so we can rewind the reader here to begin the next chunk
|
||||
readWindow();
|
||||
} catch (IOException ioEx) {
|
||||
throw new RuntimeException("IOException while reading chunk.", ioEx);
|
||||
}
|
||||
try {
|
||||
reader.reset(); //reset the reader the so the next chunk can begin at the position marked above
|
||||
} catch (IOException ex) {
|
||||
throw new RuntimeException("IOException while resetting chunk reader.", ex);
|
||||
}
|
||||
|
||||
if (endOfReaderReached) {
|
||||
/* if we have reached the end of the content,we won't make another
|
||||
* overlapping chunk, so the base chunk can be extended to the end. */
|
||||
baseChunkSizeChars = currentChunk.length();
|
||||
}
|
||||
//sanitize the text and return a Chunk object, that includes the base chunk length.
|
||||
return new Chunk(sanitizeToUTF8(currentChunk), baseChunkSizeChars);
|
||||
}
|
||||
|
||||
/**
|
||||
* Read the base chunk from the reader, and attempt to break at whitespace.
|
||||
*
|
||||
* @throws IOException if there is a problem reading from the reader.
|
||||
*/
|
||||
private void readBaseChunk() throws IOException {
|
||||
//read the chunk until the minimum base chunk size
|
||||
readHelper(MINIMUM_BASE_CHUNK_SIZE, false);
|
||||
//keep reading until the maximum base chunk size or white space is reached.
|
||||
whitespaceFound = false;
|
||||
readHelper(MAXIMUM_BASE_CHUNK_SIZE, true);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Read the window from the reader, and attempt to break at whitespace.
|
||||
*
|
||||
* @throws IOException if there is a problem reading from the reader.
|
||||
*/
|
||||
private void readWindow() throws IOException {
|
||||
//read the window, leaving some room to look for white space to break at.
|
||||
int windowEnd = Math.min(MAX_TOTAL_CHUNK_SIZE - WHITE_SPACE_BUFFER_SIZE, chunkSizeBytes + 1024);
|
||||
readHelper(windowEnd, false);
|
||||
whitespaceFound = false;
|
||||
//keep reading until the max chunk size, or until whitespace is reached.
|
||||
windowEnd = Math.min(MAX_TOTAL_CHUNK_SIZE, chunkSizeBytes + 1024);
|
||||
readHelper(windowEnd, true);
|
||||
}
|
||||
|
||||
/** Helper method that implements reading in a loop.
|
||||
*
|
||||
* @param maxBytes The max cummulative length of the content,in
|
||||
* bytes, to read from the Reader. That is, when
|
||||
* chunkSizeBytes >= maxBytes stop reading.
|
||||
* @param inWhiteSpaceBuffer Should the current read stop once whitespace is
|
||||
* found?
|
||||
*
|
||||
* @throws IOException If there is a problem reading from the Reader.
|
||||
*/
|
||||
private void readHelper(int maxBytes, boolean inWhiteSpaceBuffer) throws IOException {
|
||||
//only read one character at a time if we are looking for whitespace.
|
||||
final int readSize = inWhiteSpaceBuffer ? 1 : READ_CHARS_BUFFER_SIZE;
|
||||
|
||||
//read chars up to maxBytes, whitespaceFound if also inWhiteSpaceBuffer, or we reach the end of the reader.
|
||||
while ((chunkSizeBytes < maxBytes)
|
||||
&& (false == (inWhiteSpaceBuffer && whitespaceFound))
|
||||
&& (endOfReaderReached == false)) {
|
||||
charsRead = reader.read(tempChunkBuf, 0, readSize);
|
||||
if (-1 == charsRead) {
|
||||
//this is the last chunk
|
||||
endOfReaderReached = true;
|
||||
} else {
|
||||
if (inWhiteSpaceBuffer) {
|
||||
//chec for whitespace.
|
||||
whitespaceFound = Character.isWhitespace(tempChunkBuf[0]);
|
||||
}
|
||||
|
||||
//add read chars to the chunk and update the length.
|
||||
String chunkSegment = new String(tempChunkBuf, 0, charsRead);
|
||||
chunkSizeBytes += Utf8.encodedLength(chunkSegment);
|
||||
currentChunk.append(chunkSegment);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Represents one chunk as the text in it and the length of the base chunk, in
|
||||
* chars.
|
||||
*/
|
||||
class Chunk {
|
||||
|
||||
private final StringBuilder sb;
|
||||
private final int chunksize;
|
||||
|
||||
Chunk(StringBuilder sb, int baseChunkLength) {
|
||||
this.sb = sb;
|
||||
this.chunksize = baseChunkLength;
|
||||
}
|
||||
|
||||
@Override
|
||||
public String toString() {
|
||||
return sb.toString();
|
||||
}
|
||||
|
||||
int getBaseChunkLength() {
|
||||
return chunksize;
|
||||
}
|
||||
}
|
||||
|
||||
@ -107,7 +107,7 @@ class StringsTextExtractor extends FileTextExtractor {
|
||||
}
|
||||
|
||||
@Override
|
||||
public InputStreamReader getReader(AbstractFile sourceFile) throws Ingester.IngesterException {
|
||||
public InputStreamReader getReader(AbstractFile sourceFile) throws TextExtractorException {
|
||||
InputStream stringStream = getInputStream(sourceFile);
|
||||
return new InputStreamReader(stringStream, Server.DEFAULT_INDEXED_TEXT_CHARSET);
|
||||
}
|
||||
|
||||
@ -30,7 +30,6 @@ import org.sleuthkit.datamodel.SleuthkitVisitableItem;
|
||||
*/
|
||||
interface TextExtractor< TextSource extends SleuthkitVisitableItem> {
|
||||
|
||||
|
||||
/**
|
||||
* Is this extractor configured such that no extraction will/should be done?
|
||||
*
|
||||
@ -46,7 +45,6 @@ interface TextExtractor< TextSource extends SleuthkitVisitableItem> {
|
||||
*/
|
||||
abstract void logWarning(String msg, Exception ex);
|
||||
|
||||
|
||||
/**
|
||||
* Get a reader that over the text extracted from the given source.
|
||||
*
|
||||
@ -57,7 +55,7 @@ interface TextExtractor< TextSource extends SleuthkitVisitableItem> {
|
||||
*
|
||||
* @throws org.sleuthkit.autopsy.keywordsearch.Ingester.IngesterException
|
||||
*/
|
||||
abstract Reader getReader(TextSource source) throws Ingester.IngesterException;
|
||||
abstract Reader getReader(TextSource source) throws TextExtractorException;
|
||||
|
||||
/**
|
||||
* Get the 'object' id of the given source.
|
||||
@ -76,4 +74,15 @@ interface TextExtractor< TextSource extends SleuthkitVisitableItem> {
|
||||
* @return
|
||||
*/
|
||||
abstract String getName(TextSource source);
|
||||
|
||||
class TextExtractorException extends Exception {
|
||||
|
||||
public TextExtractorException(String message) {
|
||||
super(message);
|
||||
}
|
||||
|
||||
public TextExtractorException(String message, Throwable cause) {
|
||||
super(message, cause);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@ -36,7 +36,6 @@ import org.apache.tika.metadata.Metadata;
|
||||
import org.apache.tika.parser.ParseContext;
|
||||
import org.openide.util.NbBundle;
|
||||
import org.sleuthkit.autopsy.coreutils.Logger;
|
||||
import org.sleuthkit.autopsy.keywordsearch.Ingester.IngesterException;
|
||||
import org.sleuthkit.datamodel.AbstractFile;
|
||||
import org.sleuthkit.datamodel.ReadContentInputStream;
|
||||
|
||||
@ -67,7 +66,7 @@ class TikaTextExtractor extends FileTextExtractor {
|
||||
}
|
||||
|
||||
@Override
|
||||
public Reader getReader(AbstractFile sourceFile) throws IngesterException, MissingResourceException {
|
||||
public Reader getReader(AbstractFile sourceFile) throws TextExtractorException, MissingResourceException {
|
||||
ReadContentInputStream stream = new ReadContentInputStream(sourceFile);
|
||||
|
||||
Metadata metadata = new Metadata();
|
||||
@ -81,12 +80,12 @@ class TikaTextExtractor extends FileTextExtractor {
|
||||
} catch (TimeoutException te) {
|
||||
final String msg = NbBundle.getMessage(this.getClass(), "AbstractFileTikaTextExtract.index.tikaParseTimeout.text", sourceFile.getId(), sourceFile.getName());
|
||||
logWarning(msg, te);
|
||||
throw new IngesterException(msg);
|
||||
throw new TextExtractorException(msg, te);
|
||||
} catch (Exception ex) {
|
||||
KeywordSearch.getTikaLogger().log(Level.WARNING, "Exception: Unable to Tika parse the content" + sourceFile.getId() + ": " + sourceFile.getName(), ex.getCause()); //NON-NLS
|
||||
final String msg = NbBundle.getMessage(this.getClass(), "AbstractFileTikaTextExtract.index.exception.tikaParse.msg", sourceFile.getId(), sourceFile.getName());
|
||||
logWarning(msg, ex);
|
||||
throw new IngesterException(msg, ex);
|
||||
throw new TextExtractorException(msg, ex);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
Loading…
x
Reference in New Issue
Block a user