Merge branch 'develop' of https://github.com/sleuthkit/autopsy into vm_detection

Core/src/org/sleuthkit/autopsy/datamodel/AbstractAbstractFileNode.java

@@ -43,7 +43,7 @@ public abstract class AbstractAbstractFileNode<T extends AbstractFile> extends A
     private static final Logger LOGGER = Logger.getLogger(AbstractAbstractFileNode.class.getName());
 
     /**
-     * @param <T>          type of the AbstractFile data to encapsulate
+     * @param <T> type of the AbstractFile data to encapsulate
      * @param abstractFile file to encapsulate
      */
     AbstractAbstractFileNode(T abstractFile) {
@@ -228,6 +228,13 @@ public abstract class AbstractAbstractFileNode<T extends AbstractFile> extends A
                     public String toString() {
                         return NbBundle.getMessage(this.getClass(), "AbstractAbstractFileNode.objectId");
 
+                    }
+                },
+        MIMETYPE {
+                    @Override
+                    public String toString() {
+                        return NbBundle.getMessage(this.getClass(), "AbstractAbstractFileNode.mimeType");
+
                     }
                 },
     }
@@ -235,8 +242,8 @@ public abstract class AbstractAbstractFileNode<T extends AbstractFile> extends A
     /**
      * Fill map with AbstractFile properties
      *
-     * @param map     map with preserved ordering, where property names/values
+     * @param map map with preserved ordering, where property names/values are
-     *                are put
+     * put
      * @param content to extract properties from
      */
     public static void fillPropertyMap(Map<String, Object> map, AbstractFile content) {
@@ -268,6 +275,7 @@ public abstract class AbstractAbstractFileNode<T extends AbstractFile> extends A
         map.put(AbstractFilePropertyType.HASHSETS.toString(), getHashSetHitsForFile(content));
         map.put(AbstractFilePropertyType.MD5HASH.toString(), content.getMd5Hash() == null ? "" : content.getMd5Hash());
         map.put(AbstractFilePropertyType.ObjectID.toString(), content.getId());
+        map.put(AbstractFilePropertyType.MIMETYPE.toString(), content.getMIMEType() == null ? "" : content.getMIMEType());
     }
 
     static String getContentDisplayName(AbstractFile file) {

Core/src/org/sleuthkit/autopsy/datamodel/Bundle.properties

@@ -18,6 +18,7 @@ AbstractAbstractFileNode.typeMetaColLbl=Type(Meta)
 AbstractAbstractFileNode.knownColLbl=Known
 AbstractAbstractFileNode.inHashsetsColLbl=In Hashsets
 AbstractAbstractFileNode.md5HashColLbl=MD5 Hash
+AbstractAbstractFileNode.mimeType = MIME Type
 AbstractContentChildren.CreateTSKNodeVisitor.exception.noNodeMsg=No Node defined for the given SleuthkitItem
 AbstractContentChildren.createAutopsyNodeVisitor.exception.noNodeMsg=No Node defined for the given DisplayableItem
 AbstractContentNode.exception.cannotChangeSysName.msg=Cannot change the system name.

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/FXMLConstructor.java

@@ -23,9 +23,9 @@ import java.net.MalformedURLException;
 import java.net.URL;
 import java.util.logging.Level;
 import javafx.fxml.FXMLLoader;
-import javafx.scene.Node;
 import org.apache.commons.lang3.StringUtils;
 import org.sleuthkit.autopsy.coreutils.Logger;
+
 /**
  * This class supports programmer productivity by abstracting frequently used
  * code to load FXML-defined GUI components,
@@ -38,7 +38,7 @@ public class FXMLConstructor {
 
     private static Logger logger = Logger.getLogger(FXMLConstructor.class.getName());
 
-    static public void construct(Node n, String fxmlFileName) {
+    static public void construct(Object n, String fxmlFileName) {
         final String name = "nbres:/" + StringUtils.replace(n.getClass().getPackage().getName(), ".", "/") + "/" + fxmlFileName;
 
         try {

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/ImageGalleryController.java

@@ -75,7 +75,6 @@ import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.GroupManager;
 import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.GroupViewState;
 import org.sleuthkit.autopsy.imagegallery.gui.NoGroupsDialog;
 import org.sleuthkit.autopsy.imagegallery.gui.Toolbar;
-import org.sleuthkit.autopsy.imagegallery.gui.navpanel.NavPanel;
 import org.sleuthkit.autopsy.ingest.IngestManager;
 import org.sleuthkit.datamodel.AbstractFile;
 import org.sleuthkit.datamodel.BlackboardArtifact;
@@ -94,6 +93,7 @@ import org.sleuthkit.datamodel.TskData;
 public final class ImageGalleryController implements Executor {
 
     private final Executor execDelegate = Executors.newSingleThreadExecutor();
+    private Runnable showTree;
 
     @Override
     public void execute(Runnable command) {
@@ -153,7 +153,7 @@ public final class ImageGalleryController implements Executor {
 
     private Node infoOverlay;
     private SleuthkitCase sleuthKitCase;
-    private NavPanel navPanel;
+//    private NavPanel navPanel;
 
     public ReadOnlyBooleanProperty getMetaDataCollapsed() {
         return metaDataCollapsed.getReadOnlyProperty();
@@ -266,8 +266,8 @@ public final class ImageGalleryController implements Executor {
 
     @ThreadConfined(type = ThreadConfined.ThreadType.ANY)
     public void advance(GroupViewState newState, boolean forceShowTree) {
-        if (Objects.nonNull(navPanel) && forceShowTree) {
+        if (forceShowTree && showTree != null) {
-            navPanel.showTree();
+            showTree.run();
         }
         historyManager.advance(newState);
     }
@@ -482,8 +482,8 @@ public final class ImageGalleryController implements Executor {
         return tagsManager;
     }
 
-    public void setNavPanel(NavPanel navPanel) {
+    public void setShowTree(Runnable showTree) {
-        this.navPanel = navPanel;
+        this.showTree = showTree;
     }
 
     public UndoRedoManager getUndoManager() {

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/ImageGalleryTopComponent.java

@@ -1,7 +1,7 @@
 /*
  * Autopsy Forensic Browser
  *
- * Copyright 2013 Basis Technology Corp.
+ * Copyright 2013-16 Basis Technology Corp.
  * Contact: carrier <at> sleuthkit <dot> org
  *
  * Licensed under the Apache License, Version 2.0 (the "License");
@@ -23,7 +23,9 @@ import javafx.application.Platform;
 import javafx.embed.swing.JFXPanel;
 import javafx.scene.Scene;
 import javafx.scene.control.SplitPane;
+import javafx.scene.control.TabPane;
 import javafx.scene.layout.BorderPane;
+import javafx.scene.layout.Priority;
 import javafx.scene.layout.StackPane;
 import javafx.scene.layout.VBox;
 import org.netbeans.api.settings.ConvertAsProperties;
@@ -40,7 +42,8 @@ import org.sleuthkit.autopsy.imagegallery.gui.SummaryTablePane;
 import org.sleuthkit.autopsy.imagegallery.gui.Toolbar;
 import org.sleuthkit.autopsy.imagegallery.gui.drawableviews.GroupPane;
 import org.sleuthkit.autopsy.imagegallery.gui.drawableviews.MetaDataPane;
-import org.sleuthkit.autopsy.imagegallery.gui.navpanel.NavPanel;
+import org.sleuthkit.autopsy.imagegallery.gui.navpanel.GroupTree;
+import org.sleuthkit.autopsy.imagegallery.gui.navpanel.HashHitGroupList;
 
 /**
  * Top component which displays ImageGallery interface.
@@ -92,7 +95,7 @@ public final class ImageGalleryTopComponent extends TopComponent implements Expl
     }
 
     public static void closeTopComponent() {
-        if(topComponentInitialized){
+        if (topComponentInitialized) {
             final TopComponent etc = WindowManager.getDefault().findTopComponent("ImageGalleryTopComponent");
             if (etc != null) {
                 try {
@@ -122,7 +125,8 @@ public final class ImageGalleryTopComponent extends TopComponent implements Expl
 
     private GroupPane groupPane;
 
-    private NavPanel navPanel;
+    private GroupTree groupTree;
+    private HashHitGroupList hashHitList;
 
     private VBox leftPane;
 
@@ -149,8 +153,13 @@ public final class ImageGalleryTopComponent extends TopComponent implements Expl
 
             metaDataTable = new MetaDataPane(controller);
 
-            navPanel = new NavPanel(controller);
+            groupTree = new GroupTree(controller);
-            leftPane = new VBox(navPanel, new SummaryTablePane(controller));
+            hashHitList = new HashHitGroupList(controller);
+
+            TabPane tabPane = new TabPane(groupTree, hashHitList);
+
+            VBox.setVgrow(tabPane, Priority.ALWAYS);
+            leftPane = new VBox(tabPane, new SummaryTablePane(controller));
             SplitPane.setResizableWithParent(leftPane, Boolean.FALSE);
             SplitPane.setResizableWithParent(groupPane, Boolean.TRUE);
             SplitPane.setResizableWithParent(metaDataTable, Boolean.FALSE);
@@ -158,7 +167,7 @@ public final class ImageGalleryTopComponent extends TopComponent implements Expl
             splitPane.setDividerPositions(0.0, 1.0);
 
             ImageGalleryController.getDefault().setStacks(fullUIStack, centralStack);
-            ImageGalleryController.getDefault().setNavPanel(navPanel);
+            ImageGalleryController.getDefault().setShowTree(() -> tabPane.getSelectionModel().select(groupTree));
         });
     }
 

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/datamodel/grouping/GroupManager.java

@@ -39,6 +39,8 @@ import java.util.stream.Stream;
 import javafx.application.Platform;
 import javafx.beans.property.ReadOnlyDoubleProperty;
 import javafx.beans.property.ReadOnlyDoubleWrapper;
+import javafx.beans.property.ReadOnlyObjectProperty;
+import javafx.beans.property.ReadOnlyObjectWrapper;
 import javafx.collections.FXCollections;
 import javafx.collections.ObservableList;
 import static javafx.concurrent.Worker.State.CANCELLED;
@@ -116,10 +118,13 @@ public class GroupManager {
      * --- current grouping/sorting attributes ---
      */
     private volatile GroupSortBy sortBy = GroupSortBy.NONE;
-
     private volatile DrawableAttribute<?> groupBy = DrawableAttribute.PATH;
-
     private volatile SortOrder sortOrder = SortOrder.ASCENDING;
+
+    private final ReadOnlyObjectWrapper<GroupSortBy> sortByProp = new ReadOnlyObjectWrapper<>(sortBy);
+    private final ReadOnlyObjectWrapper< DrawableAttribute<?>> groupByProp = new ReadOnlyObjectWrapper<>(groupBy);
+    private final ReadOnlyObjectWrapper<SortOrder> sortOrderProp = new ReadOnlyObjectWrapper<>(sortOrder);
+
     private final ReadOnlyDoubleWrapper regroupProgress = new ReadOnlyDoubleWrapper();
 
     public void setDB(DrawableDB db) {
@@ -424,24 +429,39 @@ public class GroupManager {
         return sortBy;
     }
 
-    public void setSortBy(GroupSortBy sortBy) {
+    void setSortBy(GroupSortBy sortBy) {
         this.sortBy = sortBy;
+        Platform.runLater(() -> sortByProp.set(sortBy));
+    }
+
+    public ReadOnlyObjectProperty<GroupSortBy> getSortByProperty() {
+        return sortByProp.getReadOnlyProperty();
     }
 
     public DrawableAttribute<?> getGroupBy() {
         return groupBy;
     }
 
-    public void setGroupBy(DrawableAttribute<?> groupBy) {
+    void setGroupBy(DrawableAttribute<?> groupBy) {
         this.groupBy = groupBy;
+        Platform.runLater(() -> groupByProp.set(groupBy));
+    }
+
+    public ReadOnlyObjectProperty<DrawableAttribute<?>> getGroupByProperty() {
+        return groupByProp.getReadOnlyProperty();
     }
 
     public SortOrder getSortOrder() {
         return sortOrder;
     }
 
-    public void setSortOrder(SortOrder sortOrder) {
+    void setSortOrder(SortOrder sortOrder) {
         this.sortOrder = sortOrder;
+        Platform.runLater(() -> sortOrderProp.set(sortOrder));
+    }
+
+    public ReadOnlyObjectProperty<SortOrder> getSortOrderProperty() {
+        return sortOrderProp.getReadOnlyProperty();
     }
 
     /**

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupComparators.java

@@ -0,0 +1,82 @@
+/*
+ * Autopsy Forensic Browser
+ *
+ * Copyright 2013-16 Basis Technology Corp.
+ * Contact: carrier <at> sleuthkit <dot> org
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
+
+import com.google.common.collect.ImmutableList;
+import java.util.Comparator;
+import java.util.function.Function;
+import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
+
+/**
+ *
+ */
+final class GroupComparators<T extends Comparable<T>> implements Comparator<DrawableGroup> {
+
+    static final GroupComparators<Long> UNCATEGORIZED_COUNT =
+            new GroupComparators<>("Uncategorized Count", DrawableGroup::getUncategorizedCount, String::valueOf, false);
+
+    static final GroupComparators<String> ALPHABETICAL =
+            new GroupComparators<>("Group Name", DrawableGroup::getGroupByValueDislpayName, String::valueOf, false);
+
+    static final GroupComparators<Long> HIT_COUNT =
+            new GroupComparators<>("Hit Count", DrawableGroup::getHashSetHitsCount, String::valueOf, true);
+
+    static final GroupComparators<Integer> FILE_COUNT =
+            new GroupComparators<>("Group Size", DrawableGroup::getSize, String::valueOf, true);
+
+    static final GroupComparators<Double> HIT_FILE_RATIO =
+            new GroupComparators<>("Hit Density", DrawableGroup::getHashHitDensity, density -> String.format("%.2f", density) + "%", true);
+
+    private final static ImmutableList<GroupComparators<?>> values = ImmutableList.of(UNCATEGORIZED_COUNT, ALPHABETICAL, HIT_COUNT, FILE_COUNT, HIT_FILE_RATIO);
+
+    public static ImmutableList<GroupComparators<?>> getValues() {
+        return values;
+    }
+
+    private final Function<DrawableGroup, T> extractor;
+    private final Function<T, String> valueFormatter;
+    private final boolean orderReveresed;
+    private final String displayName;
+
+    private GroupComparators(String displayName, Function<DrawableGroup, T> extractor, Function<T, String> formatter, boolean defaultOrderReversed) {
+        this.displayName = displayName;
+        this.extractor = extractor;
+        this.orderReveresed = defaultOrderReversed;
+        this.valueFormatter = formatter;
+    }
+
+    @Override
+    public int compare(DrawableGroup o1, DrawableGroup o2) {
+        int compareTo = extractor.apply(o1).compareTo(extractor.apply(o2));
+        return orderReveresed ? -compareTo : compareTo;
+    }
+
+    public String getDisplayName() {
+        return displayName;
+    }
+
+    @Override
+    public String toString() {
+        return displayName;
+    }
+
+    String getFormattedValueOfGroup(DrawableGroup group) {
+        return valueFormatter.apply(extractor.apply(group));
+    }
+}

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupListCell.java

@@ -0,0 +1,177 @@
+/*
+ * Autopsy Forensic Browser
+ *
+ * Copyright 2015 Basis Technology Corp.
+ * Contact: carrier <at> sleuthkit <dot> org
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
+
+import static java.util.Objects.isNull;
+import java.util.Optional;
+import javafx.application.Platform;
+import javafx.beans.InvalidationListener;
+import javafx.beans.Observable;
+import javafx.beans.property.ReadOnlyObjectProperty;
+import javafx.scene.control.ListCell;
+import javafx.scene.control.OverrunStyle;
+import javafx.scene.control.Tooltip;
+import javafx.scene.image.Image;
+import javafx.scene.image.ImageView;
+import javax.annotation.Nonnull;
+import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
+
+/**
+ *
+ */
+class GroupListCell extends ListCell<DrawableGroup> {
+
+    /**
+     * icon to use if this cell's TreeNode doesn't represent a group but just a
+     * folder(with no DrawableFiles) in the file system hierarchy.
+     */
+    private static final Image EMPTY_FOLDER_ICON =
+            new Image(GroupTreeCell.class.getResourceAsStream("/org/sleuthkit/autopsy/imagegallery/images/folder.png"));
+
+    /**
+     * reference to group files listener that allows us to remove it from a
+     * group when a new group is assigned to this Cell
+     */
+    private final InvalidationListener fileCountListener = (Observable o) -> {
+        final String text = getGroupName() + getCountsText();
+        Platform.runLater(() -> {
+            setText(text);
+            setTooltip(new Tooltip(text));
+        });
+    };
+
+    /**
+     * reference to group seen listener that allows us to remove it from a group
+     * when a new group is assigned to this Cell
+     */
+    private final InvalidationListener seenListener = (Observable o) -> {
+        final String style = getSeenStyleClass();
+        Platform.runLater(() -> {
+            setStyle(style);
+        });
+    };
+
+    private final ReadOnlyObjectProperty<GroupComparators<?>> sortOrder;
+
+    GroupListCell(ReadOnlyObjectProperty<GroupComparators<?>> sortOrderProperty) {
+
+        this.sortOrder = sortOrderProperty;
+        getStylesheets().add(GroupTreeCell.class.getResource("GroupTreeCell.css").toExternalForm());
+        getStyleClass().add("groupTreeCell");        //reduce  indent to 5, default is 10 which uses up a lot of space.
+
+        //since end of path is probably more interesting put ellipsis at front
+        setTextOverrun(OverrunStyle.LEADING_ELLIPSIS);
+        Platform.runLater(() -> {
+            prefWidthProperty().bind(getListView().widthProperty().subtract(15));
+        });
+
+    }
+
+    /**
+     * {@inheritDoc }
+     */
+    @Override
+    protected synchronized void updateItem(final DrawableGroup group, boolean empty) {
+        //if there was a previous group, remove the listeners
+        Optional.ofNullable(getItem())
+                .ifPresent(oldGroup -> {
+                    sortOrder.removeListener(fileCountListener);
+                    oldGroup.fileIds().removeListener(fileCountListener);
+                    oldGroup.seenProperty().removeListener(seenListener);
+                    oldGroup.uncatCountProperty().removeListener(fileCountListener);
+                });
+
+        super.updateItem(group, empty);
+
+        if (isNull(group) || empty) {
+            Platform.runLater(() -> {
+                setTooltip(null);
+                setText(null);
+                setGraphic(null);
+                setStyle("");
+            });
+        } else {
+            if (isNull(group)) {
+                final String text = getGroupName();
+                //"dummy" group in file system tree <=>  a folder with no drawables
+                Platform.runLater(() -> {
+                    setTooltip(new Tooltip(text));
+                    setText(text);
+                    setGraphic(new ImageView(EMPTY_FOLDER_ICON));
+                    setStyle("");
+                });
+
+            } else {
+                //if number of files in this group changes (eg a file is recategorized), update counts via listener
+                group.fileIds().addListener(fileCountListener);
+                group.uncatCountProperty().addListener(fileCountListener);
+                sortOrder.addListener(fileCountListener);
+                //if the seen state of this group changes update its style
+                group.seenProperty().addListener(seenListener);
+
+                //and use icon corresponding to group type
+                final Image icon = group.groupKey.getAttribute().getIcon();
+                final String text = getGroupName() + getCountsText();
+                final String style = getSeenStyleClass();
+                Platform.runLater(() -> {
+                    setTooltip(new Tooltip(text));
+                    setGraphic(new ImageView(icon));
+                    setText(text);
+                    setStyle(style);
+                });
+            }
+        }
+    }
+
+    private String getGroupName() {
+        return Optional.ofNullable(getItem())
+                .map(group -> group.getGroupByValueDislpayName())
+                .orElse("");
+    }
+
+    /**
+     * return the styleClass to apply based on the assigned group's seen status
+     *
+     * @return the style class to apply
+     */
+    @Nonnull
+    private String getSeenStyleClass() {
+        return Optional.ofNullable(getItem())
+                .map(DrawableGroup::isSeen)
+                .map(seen -> seen ? "" : "-fx-font-weight:bold;")
+                .orElse(""); //if item is null or group is null
+    }
+
+    /**
+     * get the counts part of the text to apply to this cell, including
+     * parentheses
+     *
+     * @return get the counts part of the text to apply to this cell
+     */
+    @Nonnull
+    private String getCountsText() {
+
+        return Optional.ofNullable(getItem())
+                .map(group ->
+                        " (" + (sortOrder.get() == GroupComparators.ALPHABETICAL
+                                ? group.getSize()
+                                : sortOrder.get().getFormattedValueOfGroup(group)) + ")"
+                ).orElse(""); //if item is null or group is null
+    }
+}

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupTree.java

@@ -0,0 +1,149 @@
+/*
+ * Autopsy Forensic Browser
+ *
+ * Copyright 2016 Basis Technology Corp.
+ * Contact: carrier <at> sleuthkit <dot> org
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
+
+import java.util.Arrays;
+import java.util.List;
+import java.util.Optional;
+import java.util.function.Function;
+import javafx.application.Platform;
+import javafx.beans.binding.Bindings;
+import javafx.beans.binding.BooleanBinding;
+import javafx.collections.ListChangeListener;
+import javafx.fxml.FXML;
+import javafx.scene.control.SelectionModel;
+import javafx.scene.control.TreeItem;
+import javafx.scene.control.TreeView;
+import javafx.scene.image.ImageView;
+import org.apache.commons.lang3.StringUtils;
+import org.sleuthkit.autopsy.coreutils.ThreadConfined;
+import org.sleuthkit.autopsy.imagegallery.FXMLConstructor;
+import org.sleuthkit.autopsy.imagegallery.ImageGalleryController;
+import org.sleuthkit.autopsy.imagegallery.datamodel.DrawableAttribute;
+import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
+
+/**
+ * Shows path based groups as a tree and others kinds of groups as a flat list (
+ * a tree with an invisible root and only one level of children). Shows controls
+ * to adjust the sorting only in flat list mode.
+ */
+final public class GroupTree extends NavPanel<TreeItem<GroupTreeNode>> {
+
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    private final GroupTreeItem groupTreeRoot = new GroupTreeItem("", null, true);
+
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    private final TreeView<GroupTreeNode> groupTree = new TreeView<>(groupTreeRoot);
+
+    public GroupTree(ImageGalleryController controller) {
+        super(controller);
+        FXMLConstructor.construct(this, "NavPanel.fxml");
+    }
+
+    @FXML
+    @Override
+    void initialize() {
+        super.initialize();
+        setText("All Groups");
+        setGraphic(new ImageView("org/sleuthkit/autopsy/imagegallery/images/Folder-icon.png"));
+
+        getBorderPane().setCenter(groupTree);
+
+        //only show sorting controls if not grouping by path
+        BooleanBinding groupedByPath = Bindings.equal(getGroupManager().getGroupByProperty(), DrawableAttribute.PATH);
+        getToolBar().visibleProperty().bind(groupedByPath.not());
+        getToolBar().managedProperty().bind(groupedByPath.not());
+
+        groupTree.setCellFactory(treeView -> new GroupTreeCell(getSortByBox().getSelectionModel().selectedItemProperty()));
+        groupTree.setShowRoot(false);
+        getGroupManager().getAnalyzedGroups().addListener((ListChangeListener.Change<? extends DrawableGroup> change) -> {
+            while (change.next()) {
+                change.getAddedSubList().stream().forEach(this::insertGroup);
+                change.getRemoved().stream().forEach(this::removeFromTree);
+            }
+        });
+
+        for (DrawableGroup g : getGroupManager().getAnalyzedGroups()) {
+            insertGroup(g);
+        }
+    }
+
+    /**
+     * Set the tree to the passed in group
+     *
+     * @param grouping
+     */
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    @Override
+    void setFocusedGroup(DrawableGroup grouping) {
+        final GroupTreeItem treeItemForGroup = groupTreeRoot.getTreeItemForPath(groupingToPath(grouping));
+
+        if (treeItemForGroup != null) {
+            groupTree.getSelectionModel().select(treeItemForGroup);
+            Platform.runLater(() -> {
+                int row = groupTree.getRow(treeItemForGroup);
+                if (row != -1) {
+                    groupTree.scrollTo(row - 2); //put newly selected row 3 from the top
+                }
+            });
+        }
+    }
+
+    @Override
+    Function<TreeItem<GroupTreeNode>, DrawableGroup> getDataItemMapper() {
+        return treeItem -> treeItem.getValue().getGroup();
+    }
+
+    @Override
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    SelectionModel<TreeItem<GroupTreeNode>> getSelectionModel() {
+        return groupTree.getSelectionModel();
+    }
+
+    @Override
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    void applyGroupComparator() {
+        groupTreeRoot.resortChildren(getComparator());
+    }
+
+    @Override
+    GroupComparators<String> getDefaultComparator() {
+        return GroupComparators.ALPHABETICAL;
+    }
+
+    private void insertGroup(DrawableGroup g) {
+        groupTreeRoot.insert(groupingToPath(g), g, true);
+    }
+
+    private void removeFromTree(DrawableGroup g) {
+        Optional.ofNullable(groupTreeRoot.getTreeItemForGroup(g))
+                .ifPresent(GroupTreeItem::removeFromParent);
+    }
+
+    private static List<String> groupingToPath(DrawableGroup g) {
+        String path = g.groupKey.getValueDisplayName();
+        if (g.groupKey.getAttribute() != DrawableAttribute.PATH) {
+            String stripStart = StringUtils.strip(path, "/");
+            return Arrays.asList(stripStart);
+        } else {
+            String[] cleanPathTokens = StringUtils.stripStart(path, "/").split("/");
+            return Arrays.asList(cleanPathTokens);
+        }
+    }
+}

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupTreeCell.java

@@ -40,7 +40,7 @@ import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
  * TODO: we should use getStyleClass().add() rather than setStyle but it didn't
  * seem to work properly
  */
-class GroupTreeCell extends TreeCell<TreeNode> {
+class GroupTreeCell extends TreeCell<GroupTreeNode> {
 
     /**
      * icon to use if this cell's TreeNode doesn't represent a group but just a
@@ -71,11 +71,9 @@ class GroupTreeCell extends TreeCell<TreeNode> {
             setStyle(style);
         });
     };
+    private final ReadOnlyObjectProperty<GroupComparators<?>> sortOrder;
 
-    private final ReadOnlyObjectProperty<TreeNodeComparator<?>> sortOrder;
+    GroupTreeCell(ReadOnlyObjectProperty<GroupComparators<?>> sortOrderProperty) {
-
-    GroupTreeCell(ReadOnlyObjectProperty<TreeNodeComparator<?>> sortOrderProperty) {
-
         this.sortOrder = sortOrderProperty;
         getStylesheets().add(GroupTreeCell.class.getResource("GroupTreeCell.css").toExternalForm());
         getStyleClass().add("groupTreeCell");        //reduce  indent to 5, default is 10 which uses up a lot of space.
@@ -92,12 +90,12 @@ class GroupTreeCell extends TreeCell<TreeNode> {
      * {@inheritDoc }
      */
     @Override
-    protected synchronized void updateItem(final TreeNode treeNode, boolean empty) {
+    protected synchronized void updateItem(final GroupTreeNode treeNode, boolean empty) {
         //if there was a previous group, remove the listeners
         Optional.ofNullable(getItem())
-                .map(TreeNode::getGroup)
+                .map(GroupTreeNode::getGroup)
                 .ifPresent(group -> {
-                    sortOrder.removeListener(fileCountListener);
+            sortOrder.addListener(fileCountListener);
                     group.fileIds().removeListener(fileCountListener);
             group.seenProperty().removeListener(seenListener);
             group.uncatCountProperty().removeListener(fileCountListener);
@@ -159,7 +157,7 @@ class GroupTreeCell extends TreeCell<TreeNode> {
     @Nonnull
     private String getSeenStyleClass() {
         return Optional.ofNullable(getItem())
-                .map(TreeNode::getGroup)
+                .map(GroupTreeNode::getGroup)
                 .map(DrawableGroup::isSeen)
                 .map(seen -> seen ? "" : "-fx-font-weight:bold;")
                 .orElse(""); //if item is null or group is null
@@ -173,13 +171,12 @@ class GroupTreeCell extends TreeCell<TreeNode> {
      */
     @Nonnull
     private String getCountsText() {
-
         return Optional.ofNullable(getItem())
-                .filter(treeNode -> treeNode.getGroup() != null)
+                .map(GroupTreeNode::getGroup)
-                .map(item ->
+                .map(group ->
-                        sortOrder.get() == TreeNodeComparator.ALPHABETICAL
+                        " (" + (sortOrder.get() == GroupComparators.ALPHABETICAL
-                                ? " (" + item.getSize() + ")"
+                                ? group.getSize()
-                                : " (" + sortOrder.get().getFormattedValueOfTreeNode(item) + ")")
+                                : sortOrder.get().getFormattedValueOfGroup(group)) + ")"
-                .orElse(""); //if item is null or group is null
+                ).orElse(""); //if item is null or group is null
     }
 }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupTreeItem.java

@@ -38,7 +38,7 @@ import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
  * {@link GroupTreeCell}. Each GroupTreeItem has a TreeNode which has a path
  * segment and may or may not have a group
  */
-class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeItem> {
+class GroupTreeItem extends TreeItem<GroupTreeNode> {
 
     static final Executor treeInsertTread = Executors.newSingleThreadExecutor();
 
@@ -64,12 +64,12 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
     /**
      * the comparator if any used to sort the children of this item
      */
-    private Comparator<TreeNode> comp;
+    private Comparator<DrawableGroup> comp;
 
-    GroupTreeItem(String t, DrawableGroup g, Comparator<TreeNode> comp, boolean expanded) {
+    GroupTreeItem(String t, DrawableGroup g, boolean expanded) {
-        super(new TreeNode(t, g));
+        super(new GroupTreeNode(t, g));
-        this.comp = comp;
         setExpanded(expanded);
+        comp = GroupComparators.ALPHABETICAL;
     }
 
     /**
@@ -92,7 +92,7 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
      * @param g    Group to add
      * @param tree True if it is part of a tree (versus a list)
      */
-    synchronized void insert(List<String> path, DrawableGroup g, Boolean tree) {
+    synchronized void insert(List<String> path, DrawableGroup g, boolean tree) {
         if (tree) {
             // Are we at the end of the recursion?
             if (path.isEmpty()) {
@@ -101,7 +101,7 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
                 String prefix = path.get(0);
 
                 GroupTreeItem prefixTreeItem = childMap.computeIfAbsent(prefix, (String t) -> {
-                    final GroupTreeItem newTreeItem = new GroupTreeItem(t, null, comp, false);
+                    final GroupTreeItem newTreeItem = new GroupTreeItem(t, null, false);
 
                     Platform.runLater(() -> {
                         getChildren().add(newTreeItem);
@@ -111,7 +111,7 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
 
                 // recursively go into the path
                 treeInsertTread.execute(() -> {
-                    prefixTreeItem.insert(path.subList(1, path.size()), g, tree);
+                    prefixTreeItem.insert(path.subList(1, path.size()), g, true);
                 });
 
             }
@@ -119,25 +119,16 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
             String join = StringUtils.join(path, "/");
             //flat list
             childMap.computeIfAbsent(join, (String t) -> {
-                final GroupTreeItem newTreeItem = new GroupTreeItem(t, g, comp, false);
+                final GroupTreeItem newTreeItem = new GroupTreeItem(t, g, true);
-                newTreeItem.setExpanded(true);
-
                 Platform.runLater(() -> {
                     getChildren().add(newTreeItem);
-                    if (comp != null) {
+                    getChildren().sort(Comparator.comparing(treeItem -> treeItem.getValue().getGroup(), comp));
-                        getChildren().sort(Comparator.comparing(TreeItem::getValue, comp));
-                    }
                 });
                 return newTreeItem;
             });
         }
     }
 
-    @Override
-    public int compareTo(GroupTreeItem o) {
-        return comp.compare(this.getValue(), o.getValue());
-    }
-
     synchronized GroupTreeItem getTreeItemForPath(List<String> path) {
 
         if (path.isEmpty()) {
@@ -178,9 +169,9 @@ class GroupTreeItem extends TreeItem<TreeNode> implements Comparable<GroupTreeIt
      * @param newComp
      */
     @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
-    synchronized void resortChildren(Comparator<TreeNode> newComp) {
+    synchronized void resortChildren(Comparator<DrawableGroup> newComp) {
         this.comp = newComp;
-        getChildren().sort(Comparator.comparing(TreeItem::getValue, comp));
+        getChildren().sort(Comparator.comparing(treeItem -> treeItem.getValue().getGroup(), comp));
         for (GroupTreeItem ti : childMap.values()) {
             ti.resortChildren(comp);
         }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/GroupTreeNode.java

@@ -23,7 +23,7 @@ import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
 /**
  *
  */
-class TreeNode {
+class GroupTreeNode {
 
     private final String path;
     private DrawableGroup group;
@@ -36,7 +36,7 @@ class TreeNode {
         return group;
     }
 
-    TreeNode(String path, DrawableGroup group) {
+    GroupTreeNode(String path, DrawableGroup group) {
         this.path = path;
         this.group = group;
     }
@@ -44,24 +44,4 @@ class TreeNode {
     void setGroup(DrawableGroup g) {
         group = g;
     }
-
-    public String getGroupByValueDislpayName() {
-        return (group == null) ? "" : group.getGroupByValueDislpayName();
-    }
-
-    public synchronized int getSize() {
-        return (group == null) ? 0 : group.getSize();
-    }
-
-    public double getHashHitDensity() {
-        return (group == null) ? 0 : group.getHashHitDensity();
-    }
-
-    public synchronized long getHashSetHitsCount() {
-        return (group == null) ? 0 : group.getHashSetHitsCount();
-    }
-
-    public final synchronized long getUncategorizedCount() {
-        return (group == null) ? 0 : group.getUncategorizedCount();
-    }
 }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/HashHitGroupList.java

@@ -0,0 +1,96 @@
+/*
+ * Autopsy Forensic Browser
+ *
+ * Copyright 2016 Basis Technology Corp.
+ * Contact: carrier <at> sleuthkit <dot> org
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
+
+import java.util.function.Function;
+import javafx.collections.transformation.SortedList;
+import javafx.fxml.FXML;
+import javafx.scene.control.ListView;
+import javafx.scene.control.SelectionModel;
+import javafx.scene.image.ImageView;
+import org.sleuthkit.autopsy.coreutils.ThreadConfined;
+import org.sleuthkit.autopsy.imagegallery.FXMLConstructor;
+import org.sleuthkit.autopsy.imagegallery.ImageGalleryController;
+import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
+
+/**
+ * Shows only groups with hash hits in a flat list, with controls to adjust
+ * sorting of list.
+ */
+final public class HashHitGroupList extends NavPanel<DrawableGroup> {
+
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    private final ListView<DrawableGroup> groupList = new ListView<>();
+
+    /**
+     * sorted list of groups, setting a new comparator on this changes the
+     * sorting in the ListView.
+     */
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    private SortedList<DrawableGroup> sorted;
+
+    public HashHitGroupList(ImageGalleryController controller) {
+        super(controller);
+        FXMLConstructor.construct(this, "NavPanel.fxml");
+    }
+
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    @Override
+    SelectionModel<DrawableGroup> getSelectionModel() {
+        return groupList.getSelectionModel();
+    }
+
+    @Override
+    Function< DrawableGroup, DrawableGroup> getDataItemMapper() {
+        return Function.identity(); // this view already works with groups, so do nothing
+    }
+
+    @Override
+    void applyGroupComparator() {
+        sorted.setComparator(getComparator());
+    }
+
+    @FXML
+    @Override
+    void initialize() {
+        super.initialize();
+
+        setText("Only Hash Hits");
+        setGraphic(new ImageView("org/sleuthkit/autopsy/imagegallery/images/hashset_hits.png"));
+
+        getBorderPane().setCenter(groupList);
+        sorted = getController().getGroupManager().getAnalyzedGroups().filtered((DrawableGroup t) -> t.getHashSetHitsCount() > 0).sorted();
+
+        groupList.setCellFactory(treeView -> new GroupListCell(getSortByBox().getSelectionModel().selectedItemProperty()));
+
+        groupList.setItems(sorted);
+       
+    }
+
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    @Override
+    void setFocusedGroup(DrawableGroup grouping) {
+        groupList.getSelectionModel().select(grouping);
+    }
+
+    @Override
+    GroupComparators<Long> getDefaultComparator() {
+        return GroupComparators.HIT_COUNT;
+    }
+}

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/NavPanel.fxml

@@ -4,96 +4,61 @@
 <?import javafx.collections.FXCollections?>
 <?import javafx.scene.control.ComboBox?>
 <?import javafx.scene.control.Label?>
-<?import javafx.scene.control.RadioButton?>
 <?import javafx.scene.control.Tab?>
-<?import javafx.scene.control.TabPane?>
+<?import javafx.scene.control.RadioButton?>
 <?import javafx.scene.control.ToggleGroup?>
 <?import javafx.scene.control.ToolBar?>
-<?import javafx.scene.control.TreeView?>
 <?import javafx.scene.image.Image?>
 <?import javafx.scene.image.ImageView?>
 <?import javafx.scene.layout.AnchorPane?>
 <?import javafx.scene.layout.BorderPane?>
 <?import javafx.scene.layout.VBox?>
 
-<fx:root maxHeight="1.7976931348623157E308" type="VBox" xmlns="http://javafx.com/javafx/8.0.65" xmlns:fx="http://javafx.com/fxml/1">
+
-   <children>
+<fx:root type="Tab" xmlns="http://javafx.com/javafx/8.0.65" xmlns:fx="http://javafx.com/fxml/1" closable="false" >
-      <TabPane fx:id="navTabPane" maxHeight="1.7976931348623157E308" prefHeight="-1.0" prefWidth="-1.0" tabClosingPolicy="UNAVAILABLE" VBox.vgrow="ALWAYS">
+    <content>
-            <tabs>
+        <BorderPane prefHeight="200.0" prefWidth="200.0" fx:id="borderPane">
-              <Tab fx:id="navTab" text="All Groups">
+            <top>
-                <graphic>
+                <ToolBar fx:id="toolBar" BorderPane.alignment="CENTER">
-                  <ImageView fitHeight="16.0" fitWidth="16.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
+                    <items>
-                    <image>
-                      <Image url="@../../images/folder-tree.png" />
-                    </image>
-                  </ImageView>
-                </graphic>
-               <content>
-                  <AnchorPane fx:id="navAnchor">
-                     <children>
-                      <TreeView fx:id="navTree" maxHeight="1.7976931348623157E308" minWidth="-1.0" prefHeight="-1.0" prefWidth="-1.0" style="" AnchorPane.bottomAnchor="0.0" AnchorPane.leftAnchor="0.0" AnchorPane.rightAnchor="0.0" AnchorPane.topAnchor="0.0" />
-                     </children>
-                  </AnchorPane>
-               </content>
-              </Tab>
-              <Tab fx:id="hashTab" text="Groups With Hash Hits">
-                <graphic>
-                  <ImageView fitHeight="16.0" fitWidth="16.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
-                    <image>
-                      <Image url="@../../images/hashset_hits.png" />
-                    </image>
-                  </ImageView>
-                </graphic>
-               <content>
-                  <BorderPane fx:id="treeBorder">
-                     <center>
-                        <AnchorPane fx:id="hashAnchor" />
-                     </center>
-                     <top>
-                    <ToolBar BorderPane.alignment="CENTER">
-                      <items>
                         <Label text="Sort By:" />
                         <ComboBox fx:id="sortByBox" maxWidth="-Infinity" minWidth="-Infinity">
-                          <items>
+                            <items>
-                            <FXCollections fx:factory="observableArrayList">
+                                <FXCollections fx:factory="observableArrayList">
-                              <String fx:value="Item 1" />
+                                    <String fx:value="Item 1" />
-                              <String fx:value="Item 2" />
+                                    <String fx:value="Item 2" />
-                              <String fx:value="Item 3" />
+                                    <String fx:value="Item 3" />
-                            </FXCollections>
+                                </FXCollections>
-                          </items>
+                            </items>
                         </ComboBox>
-                              <VBox alignment="CENTER_LEFT" prefHeight="-1.0" prefWidth="-1.0" spacing="2.0">
+                        <VBox alignment="CENTER_LEFT" prefHeight="-1.0" prefWidth="-1.0" spacing="2.0">
-                                 <children>
+                            <children>
-                                    <RadioButton fx:id="ascRadio" contentDisplay="LEFT" mnemonicParsing="false" selected="true" text="Ascending">
+                                <RadioButton fx:id="ascRadio" contentDisplay="LEFT" mnemonicParsing="false" selected="true" text="Ascending">
-                                       <graphic>
+                                    <graphic>
-                                          <ImageView fitHeight="0.0" fitWidth="0.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
+                                        <ImageView fitHeight="0.0" fitWidth="0.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
-                                             <image>
+                                            <image>
                                                 <Image url="@../../images/arrow_up.png" />
-                                             </image>
+                                            </image>
-                                          </ImageView>
+                                        </ImageView>
-                                       </graphic>
+                                    </graphic>
-                                       <toggleGroup>
+                                    <toggleGroup>
-                                          <ToggleGroup fx:id="orderGroup" />
+                                        <ToggleGroup fx:id="orderGroup" />
-                                       </toggleGroup>
+                                    </toggleGroup>
-                                    </RadioButton>
+                                </RadioButton>
-                                    <RadioButton fx:id="descRadio" contentDisplay="LEFT" mnemonicParsing="false" selected="false" text="Descending" toggleGroup="$orderGroup">
+                                <RadioButton fx:id="descRadio" contentDisplay="LEFT" mnemonicParsing="false" selected="false" text="Descending" toggleGroup="$orderGroup">
-                                       <graphic>
+                                    <graphic>
-                                          <ImageView fitHeight="0.0" fitWidth="0.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
+                                        <ImageView fitHeight="0.0" fitWidth="0.0" mouseTransparent="true" pickOnBounds="true" preserveRatio="true">
-                                             <image>
+                                            <image>
                                                 <Image url="@../../images/arrow_down.png" />
-                                             </image>
+                                            </image>
-                                          </ImageView>
+                                        </ImageView>
-                                       </graphic>
+                                    </graphic>
-                                    </RadioButton>
+                                </RadioButton>
-                                 </children>
+                            </children>
-                              </VBox>
+                        </VBox>
-                      </items>
+                    </items>
-                    </ToolBar>
+                </ToolBar>
-                     </top>
+            </top>
-                  </BorderPane>
+        </BorderPane>
-               </content>
+    </content>
-              </Tab>
-            </tabs>
-          </TabPane>
-   </children>
 </fx:root>

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/NavPanel.java

@@ -1,7 +1,7 @@
 /*
  * Autopsy Forensic Browser
  *
- * Copyright 2013-16 Basis Technology Corp.
+ * Copyright 2016 Basis Technology Corp.
  * Contact: carrier <at> sleuthkit <dot> org
  *
  * Licensed under the Apache License, Version 2.0 (the "License");
@@ -19,63 +19,37 @@
 package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
 
 import com.google.common.eventbus.Subscribe;
-import java.util.Arrays;
 import java.util.Comparator;
-import java.util.List;
 import java.util.Optional;
-import javafx.application.Platform;
+import java.util.function.Function;
-import javafx.collections.ListChangeListener;
 import javafx.fxml.FXML;
 import javafx.scene.control.ComboBox;
 import javafx.scene.control.RadioButton;
-import javafx.scene.control.SelectionMode;
+import javafx.scene.control.SelectionModel;
 import javafx.scene.control.Tab;
-import javafx.scene.control.TabPane;
 import javafx.scene.control.ToggleGroup;
-import javafx.scene.control.TreeItem;
+import javafx.scene.control.ToolBar;
-import javafx.scene.control.TreeView;
+import javafx.scene.layout.BorderPane;
-import javafx.scene.layout.AnchorPane;
-import javafx.scene.layout.Priority;
-import javafx.scene.layout.VBox;
-import org.apache.commons.lang3.StringUtils;
 import org.sleuthkit.autopsy.coreutils.ThreadConfined;
-import org.sleuthkit.autopsy.coreutils.ThreadConfined.ThreadType;
-import org.sleuthkit.autopsy.imagegallery.FXMLConstructor;
 import org.sleuthkit.autopsy.imagegallery.ImageGalleryController;
 import org.sleuthkit.autopsy.imagegallery.datamodel.CategoryManager;
-import org.sleuthkit.autopsy.imagegallery.datamodel.DrawableAttribute;
 import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.DrawableGroup;
+import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.GroupManager;
 import org.sleuthkit.autopsy.imagegallery.datamodel.grouping.GroupViewState;
 
 /**
- * Display two trees. one shows all folders (groups) and calls out folders with
+ * Base class for Tabs in the left hand Navigation/Context area.
- * images. the user can select folders with images to see them in the main
- * GroupPane The other shows folders with hash set hits.
  */
-final public class NavPanel extends VBox {
+abstract class NavPanel<X> extends Tab {
 
     @FXML
-    private ComboBox<TreeNodeComparator<?>> sortByBox;
+    private BorderPane borderPane;
 
     @FXML
-    private TabPane navTabPane;
+    private ToolBar toolBar;
 
     @FXML
-    private TreeView<TreeNode> navTree;
+    private ComboBox<GroupComparators<?>> sortByBox;
-
-    @FXML
-    private AnchorPane hashAnchor;
-
-    @FXML
-    private AnchorPane navAnchor;
-    @FXML
-    private Tab hashTab;
-
-    @FXML
-    private Tab navTab;
-
-    private final GroupTreeItem navTreeRoot = new GroupTreeItem("", null, TreeNodeComparator.ALPHABETICAL, true);
-    private final GroupTreeItem hashTreeRoot = new GroupTreeItem("", null, TreeNodeComparator.HIT_COUNT, true);
 
     @FXML
     private RadioButton ascRadio;
@@ -87,161 +61,155 @@ final public class NavPanel extends VBox {
     private RadioButton descRadio;
 
     private final ImageGalleryController controller;
+    private final GroupManager groupManager;
+    private final CategoryManager categoryManager;
 
-    private TreeNodeComparator<?> hashSortOrder = TreeNodeComparator.HIT_COUNT;
+    NavPanel(ImageGalleryController controller) {
-
-    public NavPanel(ImageGalleryController controller) {
         this.controller = controller;
-        FXMLConstructor.construct(this, "NavPanel.fxml");
+        this.groupManager = controller.getGroupManager();
-    }
+        this.categoryManager = controller.getCategoryManager();
-
-    @Subscribe
-    public void handleCategoryChange(CategoryManager.CategoryChangeEvent event) {
-        resortHashTree();
     }
 
     @FXML
     void initialize() {
-        assert hashTab != null : "fx:id=\"hashTab\" was not injected: check your FXML file 'NavPanel.fxml'.";
+        assert borderPane != null : "fx:id=\"borderPane\" was not injected: check your FXML file 'NavPanel.fxml'.";
-        assert navTab != null : "fx:id=\"navTab\" was not injected: check your FXML file 'NavPanel.fxml'.";
+        assert toolBar != null : "fx:id=\"toolBar\" was not injected: check your FXML file 'NavPanel.fxml'.";
-        assert navTabPane != null : "fx:id=\"navTabPane\" was not injected: check your FXML file 'NavPanel.fxml'.";
-        assert navTree != null : "fx:id=\"navTree\" was not injected: check your FXML file 'NavPanel.fxml'.";
         assert sortByBox != null : "fx:id=\"sortByBox\" was not injected: check your FXML file 'NavPanel.fxml'.";
+        assert ascRadio != null : "fx:id=\"ascRadio\" was not injected: check your FXML file 'NavPanel.fxml'.";
+        assert orderGroup != null : "fx:id=\"orderGroup\" was not injected: check your FXML file 'NavPanel.fxml'.";
+        assert descRadio != null : "fx:id=\"descRadio\" was not injected: check your FXML file 'NavPanel.fxml'.";
 
-        VBox.setVgrow(this, Priority.ALWAYS);
+        sortByBox.getItems().setAll(GroupComparators.getValues());
-
+        sortByBox.getSelectionModel().select(getDefaultComparator());
-        sortByBox.getItems().setAll(TreeNodeComparator.getValues());
+        orderGroup.selectedToggleProperty().addListener(order -> sortGroups());
-        sortByBox.getSelectionModel().select(TreeNodeComparator.ALPHABETICAL);
-
         sortByBox.getSelectionModel().selectedItemProperty().addListener(observable -> {
-
+            sortGroups();
-            if (sortByBox.getSelectionModel().getSelectedItem() == TreeNodeComparator.UNCATEGORIZED_COUNT) {
+            //only need to listen to changes in category if we are sorting by/ showing the uncategorized count
-                controller.getCategoryManager().registerListener(NavPanel.this);
+            if (sortByBox.getSelectionModel().getSelectedItem() == GroupComparators.UNCATEGORIZED_COUNT) {
+                categoryManager.registerListener(NavPanel.this);
             } else {
-                controller.getCategoryManager().unregisterListener(NavPanel.this);
+                categoryManager.unregisterListener(NavPanel.this);
             }
-            resortHashTree();
-        });
-        orderGroup.selectedToggleProperty().addListener(observable -> resortHashTree());
 
-        navTree.setCellFactory(treeView -> new GroupTreeCell(sortByBox.getSelectionModel().selectedItemProperty()));
-        navTree.setShowRoot(false);
-        navTree.getSelectionModel().setSelectionMode(SelectionMode.SINGLE);
-        navTree.getSelectionModel().selectedItemProperty().addListener(o -> updateControllersGroup());
-
-        navTree.setRoot(navTreeRoot);
-        navTabPane.getSelectionModel().selectedItemProperty().addListener(observable -> {
-            Tab selectedTab = navTabPane.getSelectionModel().getSelectedItem();
-            if (selectedTab == navTab) {
-                hashSortOrder = sortByBox.getSelectionModel().getSelectedItem();
-                sortByBox.getSelectionModel().select(TreeNodeComparator.ALPHABETICAL);
-                navTree.setRoot(navTreeRoot);
-                hashAnchor.getChildren().clear();
-                navAnchor.getChildren().add(navTree);
-            } else if (selectedTab == hashTab) {
-                sortByBox.getSelectionModel().select(hashSortOrder);
-                navTree.setRoot(hashTreeRoot);
-                navAnchor.getChildren().clear();
-                hashAnchor.getChildren().add(navTree);
-                resortHashTree();
-            }
-        });
-
-        controller.getGroupManager().getAnalyzedGroups().addListener((ListChangeListener.Change<? extends DrawableGroup> change) -> {
-            while (change.next()) {
-                change.getAddedSubList().stream().forEach(this::insertGroup);
-                change.getRemoved().stream().forEach(this::removeFromTree);
-            }
         });
 
+        //keep selection in sync with controller
         controller.viewState().addListener(observable -> {
             Optional.ofNullable(controller.viewState().get())
                     .map(GroupViewState::getGroup)
                     .ifPresent(this::setFocusedGroup);
         });
 
-        for (DrawableGroup g : controller.getGroupManager().getAnalyzedGroups()) {
+        getSelectionModel().selectedItemProperty().addListener(o -> updateControllersGroup());
-            insertGroup(g);
-        }
     }
 
-    private void insertGroup(DrawableGroup g) {
+    /**
-        navTreeRoot.insert(groupingToPath(g), g, true);
+     * @return the default comparator used by this "view" to sort groups
-        if (g.getHashSetHitsCount() > 0) {
+     */
-            hashTreeRoot.insert(groupingToPath(g), g, false);
+    abstract GroupComparators<?> getDefaultComparator();
-        }
+
+    @Subscribe
+    public void handleCategoryChange(CategoryManager.CategoryChangeEvent event) {
+        sortGroups();
     }
 
-    private void updateControllersGroup() {
+    /**
-        Optional.ofNullable(navTree.getSelectionModel().getSelectedItem())
+     * @return the a comparator that will enforce the currently selected sorting
-                .map(TreeItem::getValue)
+     *         options.
-                .map(TreeNode::getGroup)
+     */
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    Comparator<DrawableGroup> getComparator() {
+        Comparator<DrawableGroup> comparator = sortByBox.getSelectionModel().getSelectedItem();
+        return (orderGroup.getSelectedToggle() == ascRadio)
+                ? comparator
+                : comparator.reversed();
+    }
+
+    /**
+     * notify controller about group selection in this view
+     */
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    void updateControllersGroup() {
+        Optional.ofNullable(getSelectionModel().getSelectedItem())
+                .map(getDataItemMapper())
                 .ifPresent(group -> controller.advance(GroupViewState.tile(group), false));
     }
 
-    @ThreadConfined(type = ThreadType.JFX)
+    /**
-    private void resortHashTree() {
+     * Sort the groups in this view according to the currently selected sorting
-        Comparator<TreeNode> treeNodeComparator = sortByBox.getSelectionModel().getSelectedItem();
+     * options. Attempts to maintain selection.
-        if (orderGroup.getSelectedToggle() == descRadio) {
+     */
-            treeNodeComparator = treeNodeComparator.reversed();
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
-        }
+    void sortGroups() {
-        TreeItem<TreeNode> selectedItem = navTree.getSelectionModel().getSelectedItem();
+        X selectedItem = getSelectionModel().getSelectedItem();
-        hashTreeRoot.resortChildren(treeNodeComparator);
+        applyGroupComparator();
-        navTree.getSelectionModel().select(selectedItem);
+        Optional.ofNullable(selectedItem)
+                .map(getDataItemMapper())
+                .ifPresent(this::setFocusedGroup);
     }
 
     /**
-     * Set the tree to the passed in group
+     * @return a function that maps the "native" data type of this view to a
-     *
+     *         DrawableGroup
-     * @param grouping
      */
-    @ThreadConfined(type = ThreadType.JFX)
+    abstract Function<X, DrawableGroup> getDataItemMapper();
-    private void setFocusedGroup(DrawableGroup grouping) {
-        final GroupTreeItem treeItemForGroup = ((GroupTreeItem) navTree.getRoot()).getTreeItemForPath(groupingToPath(grouping));
 
-        if (treeItemForGroup != null) {
+    /**
-            navTree.getSelectionModel().select(treeItemForGroup);
+     * Apply the currently selected sorting options.
-            Platform.runLater(() -> {
+     */
-                int row = navTree.getRow(treeItemForGroup);
+    abstract void applyGroupComparator();
-                if (row != -1) {
-                    navTree.scrollTo(row - 2); //put newly selected row 3 from the top
-                }
-            });
-        }
-    }
-
-    private List<String> groupingToPath(DrawableGroup g) {
-        String path = g.groupKey.getValueDisplayName();
-        if (g.groupKey.getAttribute() != DrawableAttribute.PATH
-                || navTabPane.getSelectionModel().getSelectedItem() == hashTab) {
-            String stripStart = StringUtils.strip(path, "/");
-            return Arrays.asList(stripStart);
-        } else {
-            String[] cleanPathTokens = StringUtils.stripStart(path, "/").split("/");
-            return Arrays.asList(cleanPathTokens);
-        }
-    }
 
     /**
      *
-     * @param g        the value of g
+     * @return get the selection model
-     * @param treeRoot the value of treeRoot
      */
-    private void removeFromTree(DrawableGroup g) {
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
-        GroupTreeItem treeItemForGroup = navTreeRoot.getTreeItemForGroup(g);
+    abstract SelectionModel<X> getSelectionModel();
-        if (treeItemForGroup != null) {
-            treeItemForGroup.removeFromParent();
-        }
 
-        treeItemForGroup = hashTreeRoot.getTreeItemForGroup(g);
+    /**
-        if (treeItemForGroup != null) {
+     * attempt to set the given group as the selected/focused group in this
-            treeItemForGroup.removeFromParent();
+     * view.
-        }
+     *
+     * @param grouping the grouping to attempt to select
+     */
+    @ThreadConfined(type = ThreadConfined.ThreadType.JFX)
+    abstract void setFocusedGroup(DrawableGroup grouping);
+
+    ////boring getters 
+    BorderPane getBorderPane() {
+        return borderPane;
     }
 
-    public void showTree() {
+    ToolBar getToolBar() {
-        Platform.runLater(() -> {
+        return toolBar;
-            navTabPane.getSelectionModel().select(navTab);
-        });
     }
+
+    ComboBox<GroupComparators<?>> getSortByBox() {
+        return sortByBox;
+    }
+
+    RadioButton getAscRadio() {
+        return ascRadio;
+    }
+
+    ToggleGroup getOrderGroup() {
+        return orderGroup;
+    }
+
+    RadioButton getDescRadio() {
+        return descRadio;
+    }
+
+    ImageGalleryController getController() {
+        return controller;
+    }
+
+    GroupManager getGroupManager() {
+        return groupManager;
+    }
+
+    CategoryManager getCategoryManager() {
+        return categoryManager;
+    }
+
 }

ImageGallery/src/org/sleuthkit/autopsy/imagegallery/gui/navpanel/TreeNodeComparator.java

@@ -1,82 +0,0 @@
-/*
- * Autopsy Forensic Browser
- *
- * Copyright 2013-16 Basis Technology Corp.
- * Contact: carrier <at> sleuthkit <dot> org
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-package org.sleuthkit.autopsy.imagegallery.gui.navpanel;
-
-import com.google.common.collect.ImmutableList;
-import java.util.Comparator;
-import java.util.function.Function;
-
-/**
- *
- */
-final class TreeNodeComparator<T extends Comparable<T>> implements Comparator<TreeNode> {
-
-    static final TreeNodeComparator<Long> UNCATEGORIZED_COUNT =
-            new TreeNodeComparator<>("Uncategorized Count", TreeNode::getUncategorizedCount, String::valueOf, false);
-
-    static final TreeNodeComparator<String> ALPHABETICAL =
-            new TreeNodeComparator<>("Group Name", TreeNode::getGroupByValueDislpayName, String::valueOf, false);
-
-    static final TreeNodeComparator<Long> HIT_COUNT =
-            new TreeNodeComparator<>("Hit Count", TreeNode::getHashSetHitsCount, String::valueOf, true);
-
-    static final TreeNodeComparator<Integer> FILE_COUNT =
-            new TreeNodeComparator<>("Group Size", TreeNode::getSize, String::valueOf, true);
-
-    static final TreeNodeComparator<Double> HIT_FILE_RATIO =
-            new TreeNodeComparator<>("Hit Density", (treeNode) -> treeNode.getHashHitDensity(), density -> String.format("%.2f", density), true);
-
-    private final static ImmutableList<TreeNodeComparator<?>> values = ImmutableList.of(UNCATEGORIZED_COUNT, ALPHABETICAL, HIT_COUNT, FILE_COUNT, HIT_FILE_RATIO);
-
-    public static ImmutableList<TreeNodeComparator<?>> getValues() {
-        return values;
-    }
-
-    private final Function<TreeNode, T> extractor;
-    private final Function<T, String> valueFormatter;
-    private final boolean orderReveresed;
-    private final String displayName;
-
-    private TreeNodeComparator(String displayName, Function<TreeNode, T> extractor, Function<T, String> formatter, boolean defaultOrderReversed) {
-        this.displayName = displayName;
-        this.extractor = extractor;
-        this.orderReveresed = defaultOrderReversed;
-        this.valueFormatter = formatter;
-    }
-
-    @Override
-    public int compare(TreeNode o1, TreeNode o2) {
-        int compareTo = extractor.apply(o1).compareTo(extractor.apply(o2));
-        return orderReveresed ? -compareTo : compareTo;
-    }
-
-    public String getDisplayName() {
-        return displayName;
-    }
-
-    @Override
-    public String toString() {
-        return displayName;
-    }
-
-    String getFormattedValueOfTreeNode(TreeNode group) {
-        return valueFormatter.apply(extractor.apply(group));
-    }
-
-}